Ictalurus punctatus (channel catfish): 108276918
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Entry
108276918 CDS
T04658
Name
(RefSeq) tsukushi
KO
K08130
tsukushi
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ipu00535
]
108276918
Proteoglycans [BR:
ipu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
108276918
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_RPS2
LRR_EndoS
LRRNT
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
108276918
NCBI-ProteinID:
XP_017344518
Ensembl:
ENSIPUG00000020928
UniProt:
A0A2D0SP81
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All DBs
Position
16:2692384..2695088
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AA seq
346 aa
AA seq
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MAILLEGRVSALLVLFFSTVKTCHPGCRCEEQSFGLFNSFSLMKVDCSGLGPNTIPVSIP
LETSSLDLSSNGIRSIEGAVFSGPGYTTLSSLDLSNNLISSINGSVFSKLHYLETLDLSW
NSILNLVEGFPGLPLTEVDLSDNRIHEINLNVFRVQDRGRPLNVDLSYNLIMSVIRNKLS
QPLNIHSLNLAGNELSSVPSLRDISLRFLTLDDNPISVIDEQSFAGLKYLVHLSLSSMPE
LHTVKPQSLHDLQNLQVLDLSDNHKLKTLSAEVFRGLKSLQELNLSNCWLTSLPANILQL
LPSIKSIALRDGVNCRRIQRQEQFHRHVGRNKAEAALTCDVTGVIL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggccatcctcctggaaggaagagtttctgcacttcttgttctctttttcagcacagtg
aagacgtgccatcccgggtgccggtgtgaggagcagagtttcgggctgttcaacagcttc
agcctgatgaaagtggactgcagtggactgggaccgaatacaattccagtttcaatccct
ttagaaacttcttcgttggatctttcgtcgaatggcatccgttctatcgagggcgccgtc
ttctcgggaccgggatacaccaccctgtccagtctcgacttgagcaacaaccttatctct
tccataaatggaagcgttttctccaaactgcactatctggagacgctagatctgagctgg
aactccatcctgaaccttgtggaaggttttccgggccttcctctcaccgaggtagatctg
agcgacaaccggattcatgaaatcaacctgaatgtgtttcgagttcaggatcgtggaagg
cctctcaacgtggatctgtcttataacttgataatgtccgttataaggaataaactttca
caaccgctcaacatacatagccttaatttagcgggaaatgagctcagttccgtgccaagc
ttgcgggacatctctttacgcttcctcaccctggacgataaccccatatcggtcattgat
gaacagagcttcgctggattgaaatacctcgtccacctttctctaagctcgatgcctgag
ttacacaccgtcaaacctcaaagcttacacgatctccaaaacctccaagtgcttgacctt
tcggataaccataaactaaagacgttgagtgcagaggtttttcgtggccttaaatcactg
caggagctcaatttgtcgaactgctggctcacgtctttgccggccaacatcctccagctc
ctcccgagtattaagagcattgctctgagggacggagtgaactgtcggaggatccagagg
caggaacaatttcacagacacgtcggacggaataaagccgaggcagctctgacctgcgat
gtgactggtgtcattttgtga
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