Ictalurus punctatus (channel catfish): 108276921
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Entry
108276921 CDS
T04658
Symbol
top1mt
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108276921 (top1mt)
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108276921 (top1mt)
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Topoisomerases
108276921 (top1mt)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
108276921
NCBI-ProteinID:
XP_017344567
UniProt:
A0A2D0SPV2
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Position
1:complement(26582249..26606028)
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AA seq
868 aa
AA seq
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MKVEEEGERASKGHSHSKKRPAETDDHRIRKKAKSGSKKNLKGSEVNGNSHGSSAKNSHS
GSSHKPLQESKITSSEKLKSDAGNSGSEAEGMKLESYEDLGKRADGNNNLEVMRPQVKME
HEGNELAILSGKTKNCKSRTLSHKSSHSHKHRHKTTDDKGPILTGSRSENDWKNKNTKCS
SDQIQQAKVKQTDNSHTSLPALKEEDVEDVDQIFDPISDCTQACRSVENDLEVRKEKSSA
ERKRDKECSVNITKEKTQGQKKKRSSRSTEHNEPTKNKKAKREEDEDKEKQKEKGQAKKA
DDEAGKWKWWEEGKHADGQKWKSLEHKGPLFPPEYEPLPSNVPFLYDGKPVQLSLAAEEV
ATFYAKMLDHEYTTKENFQNNFFTDWREVMTEDERKLIKKLSKCDFSKIHKYFVEKSEVK
KNMTKEEKQVLKEEANKLTEEYGFCLLDGHKEKIGNFRLEPPGLFRGRGEHPKMGKLKKR
VQPEDVIINCSQDAKVPEPPAGHQWKRVQHENTVTWLASWVENIHGHIKYIMLNPSSKLK
GEKDWQKYETARKLKLRVDAIRREYRKAWTAREMKQRQRGVALYFIDKLALRAGNEKDDD
TADTVGCCSLRVEHITLHKHQDGQDYVVEFDFLGKDSIRYYNKVPVEKQVFKNLKLFMEN
KDPEDDLFDRISTIYLNKKLNEAMPGLTAKVFRTFNASTTLQEQLDKLTIDDMTVEEKLL
AYNRANRAVAILCNHQRAAPKTFEKSMLALQEKIKKKTEEVEKAKKELKQAKKDHKEQPS
EKSKKLVEKKEKALKRLSEQLKKLKLQETDREENKVIALGTSKLNYLDPRITVAWCKKHN
VPVEKIYNKTHRAKFAWAIDMADENFQF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggaagaagaaggtgagagagccagcaaaggccattcacacagcaagaagaga
ccagccgagacagacgaccacagaattaggaagaaggcgaaatcaggatccaagaaaaac
cttaaaggttctgaagtaaatggaaactcccacggatcgtccgcaaagaactcacactca
ggatcttcacacaaacctctgcaggaatctaagatcacaagctctgaaaaattgaagtct
gatgctgggaacagtggatctgaagccgagggcatgaagttggagtcctatgaagacttg
ggaaagagagcggatgggaacaataacttggaagtaatgcgaccacaagtgaaaatggaa
catgaaggaaatgaattagcgattttatctgggaaaactaagaactgcaagtcgagaact
ctcagccataaaagcagccacagtcacaagcatcgacacaagactacagatgacaagggt
cctatactcacaggaagcagatctgaaaatgattggaaaaataaaaacactaaatgttca
tctgatcaaattcaacaggcaaaagtgaagcagactgataatagccacacatctctgcca
gctttaaaagaggaagatgttgaagatgttgatcaaatctttgatcccatctctgactgc
acacaagcttgccggtctgttgagaatgatctagaggtgagaaaagagaaatccagtgct
gaaaggaagagggacaaagagtgctctgtcaatattacaaaagagaaaacacaaggccag
aagaaaaaaaggagctctcgcagcacagaacataatgaaccaacgaaaaataagaaggcc
aagagggaagaggacgaggacaaggaaaaacagaaagaaaaaggacaagcaaaaaaagct
gatgatgaagctgggaaatggaaatggtgggaggaagggaagcacgccgatggtcagaag
tggaaaagtcttgagcataaagggcctctcttcccaccagaatatgaacctttaccaagc
aatgtgccatttttgtatgatggaaaacctgtgcaacttagcctggctgctgaagaagta
gcaactttctatgccaagatgctggatcatgagtacaccaccaaggagaattttcaaaat
aatttcttcactgactggagggaggtaatgacagaagatgagaggaaattaatcaagaag
ctgtccaagtgtgacttcagcaaaatccataaatactttgtggaaaagtcagaagtaaag
aagaacatgaccaaagaagaaaaacaggttttaaaggaggaagctaataaactaaccgag
gagtatggattctgtctgctggatggacataaggagaaaataggcaattttcgtctggag
cctccagggctgtttagaggtcgaggggaacaccccaaaatgggcaagctgaagaaacgc
gtccagcctgaggatgtaattattaactgcagtcaagatgcgaaggtcccagagccacct
gcaggccatcagtggaagagagtgcagcatgaaaacacagtcacgtggctggcatcatgg
gtggagaacatccatggacacattaagtacatcatgctcaatcccagctccaaactcaag
ggtgagaaggactggcagaagtatgaaactgcacgtaagctgaaactgagagtggatgct
atcagacgtgagtaccgaaaggcctggactgctagagagatgaaacaaagacaacgagga
gtcgctttatacttcatcgacaagctagctctgagggctggtaatgagaaagatgatgat
accgcagacacggtgggctgctgttctctgcgtgtagagcacattactctccacaagcac
caggatggtcaggactacgtagtggagtttgacttcctgggcaaggactccatccggtac
tacaacaaagtgcctgtggaaaaacaagttttcaaaaacttgaaacttttcatggaaaac
aaggatccagaagatgacctattcgacagaatttctacaatctatctcaataagaagctg
aatgaggcaatgcctggactgaccgccaaagtgtttcgaactttcaatgcttccaccaca
ctgcaggagcagctggacaaactcaccatcgatgatatgactgtggaggaaaaactgctg
gcgtataaccgagcgaacagagctgtggctatactctgcaaccaccagagggcggcaccc
aaaacatttgagaagtccatgttggctcttcaggagaagatcaagaagaaaacagaggaa
gtggagaaagccaaaaaggagctgaagcaagcaaagaaagatcacaaggagcaaccatca
gagaagtcaaagaagctggtggagaagaaggaaaaggctttgaagaggctgtcggaacag
ttaaagaagctgaagctgcaggaaacggaccgagaggagaacaaggtcatcgctctgggc
acttccaagctcaactacctcgacccccgcatcactgtggcctggtgtaagaagcacaac
gttcctgtggagaagatctacaacaagactcacagggcgaagtttgcctgggctattgac
atggctgatgaaaacttccagttctaa
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