Ictalurus punctatus (channel catfish): 108276947
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Entry
108276947 CDS
T04658
Symbol
psd3l
Name
(RefSeq) PH and SEC7 domain-containing protein 3 isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108276947 (psd3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108276947 (psd3l)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108276947 (psd3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
108276947
NCBI-ProteinID:
XP_017344601
Ensembl:
ENSIPUG00000002000
UniProt:
A0A2D0SQ23
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All DBs
Position
16:complement(18398225..18554985)
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AA seq
1293 aa
AA seq
DB search
MGDHHQVKTSFLFIQLQSPSRAQQCQPSADTLSLVTPEELSSATTAADIARPSVGDLESI
NTRAEESITAYEDALDDTLLQSVDSKSIPEEAPTPLFDYRITEESYSSDSTRIDIRAANQ
ETTSSSSCECLTGNGSLSKTDSQECLSCELNKSPNSVSEKDNSGERIESSIWLLCQDPPE
TMSEMIQSPSLGNFPKPSLGPRMSFLYPSTESDSQNRTTPRSPDLSPTPSGFPPACAPTS
TFPPSTHRLSHSNWVHSAKHKEEAAALENAKTVPSMNAERTTFVSAVIKRSSKLYGDVCK
PAHSSLTSDVEKSSESSLAVVGAGKPNQTAWTTESLHTETAPSTMFQSTAPEKAEAFVWV
NGSSSHAQSVAKAKYEFLFGKTHDASSPGTASTCDSNPLLEDNISTTPDPSIQEDELDET
SLFQEIDRELAELLSGLTARARDAAAAEQHSQSGDATSDMIPCNGTPPSPPGTADHASEL
QNGTSDSGQTEQLKDVTFDSWCEALIQDPSSAQELQCASPALDPDTRNAPASQHKPAPVP
VTEKQEGGESADLSPKLLDASLDESSKILAEIPGIFSAFLDGGKAREKTQKKLRFVEDQA
DAEVFLNGKAEEKEQTTQDMEKPSQDNTLKAAVPVMCVSEATENSSARSVEARASESEEA
TDVFSSQFESILESERLCVTLYSSLDSLDALTSSADETDEQAVPAHAHRVVEMPLTPMIQ
QRLKESGLFMEASRRQEEVLSVSVTGKSGKAALEVTSSFLNTSTEQVDSIAGHTDGALAN
GMMGKETSDWLQSWTSSDEGLKDVLSDWDLDMGSTERQKDSTDTLNNGHRSDQEAARRLA
RRLYHLEGFRRSDVAMHLGKNNDFSKMVAEEYLTFFEFTGMTLDQSLRSFLKAFALMGET
QERERVLIHFSNRYYQCNPTILASQDEVHCLTCALMLLNSDLHGQNIGKKMTCQEFINNL
DGLNAGQDFPRDLLKALYNSIKNEKLEWAIDGDELKKSLSELADTKNDNAHTKSISRISS
SSNPFLDIAHDPNAAVYKAGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGMILYLQKDE
YKPEKALSEEDLKNAISVHHALAIKAVDYEKKPNVLKLKTADWRVFLFQAQSPEEMESWI
RVINSVAAMFSAPSFPAAIGSQKKFSRPLLPATTTRMSQEEQLKSHEAKLKHICTELAEH
RSYPPDRKVKAKEVDEYRLKEHYLEFEENRYETYVKLLKDGVKEVLSAKENDAALKKSQS
SPHLNQESQPAAAKIKRNTSERKDYRPETPKVT
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcatcatcaggtcaagacttccttccttttcatccaactacagtcaccctcc
agggcccagcagtgccaaccttctgctgacactctgagcttggtcactccagaggaatta
tcatcagccacaacagctgcagacatagcacgaccttcagtcggagacctagagagcatc
aacaccagggcggaagaaagtataacagcatacgaggatgctttagacgacaccttatta
cagagtgtggatagtaaatctataccagaggaagcacctacaccactatttgattatagg
attacagaagagagctattcctctgattcaacaaggatagatatcagggcggctaaccaa
gaaaccacttcatcatcaagctgtgaatgtttaacaggaaatgggtctctaagtaaaaca
gattctcaggagtgcttgagttgtgaactcaacaaatccccaaattcagtatctgaaaag
gacaactctggtgaacgcatagaatcctccatttggctcttgtgtcaggaccctccggaa
accatgagtgaaatgattcagtctccatcactggggaactttcccaaaccttctttaggt
cccagaatgagtttcctctacccatcaacagaatctgactcccagaacaggacaacacca
cgtagtccagatctgagcccaacgcccagtggattccctccagcctgtgcaccaacctct
acttttccaccaagcacacatcggctgtcgcacagcaactgggtgcacagtgccaaacac
aaggaggaggctgctgctctagaaaacgcaaagacagtgccgagcatgaacgcagagagg
accacttttgtttcggccgtcatcaagaggtcctcaaaactctacggggatgtctgtaaa
ccagcacatagttctttgacttctgacgttgaaaagtcttctgagtcttctctggctgta
gtaggtgcaggaaaaccaaaccaaacggcatggactacagaatctctgcacactgaaaca
gcaccatcaaccatgtttcagtctacagcacctgaaaaggccgaagcatttgtttgggtc
aacggctcctcctcgcacgctcagagcgtcgccaaggccaagtacgagtttcttttcgga
aagacgcacgacgcaagttcgccaggcactgcctctacatgtgactcgaaccctctgctg
gaggacaacatcagcacaacccctgacccctccatccaggaggatgaactcgacgagacg
tcactctttcaggagatcgacagggagctcgccgagttgctgagtggcctcacggccaga
gcccgggatgctgcggcggccgaacagcacagccaatcaggagacgccacttcagacatg
attccctgcaacgggacgcccccttctcctccgggcacagctgatcacgcctcagagcta
cagaatggcacctcagactccgggcagacagaacagctgaaggacgtgacgttcgactca
tggtgcgaggcgctgatacaggacccgagctcagcgcaggagctgcagtgtgcgagcccc
gctctcgacccagacaccaggaatgcacccgcaagccaacataaacctgcaccggtgccc
gttacggaaaagcaggagggaggcgagagtgcagacttgtcaccaaagcttctggatgcc
tctctggacgagtccagcaaaatcctggcagagatccccggcatctttagtgccttcctt
gacgggggcaaagcgcgagagaaaacccagaagaagctgcgctttgtggaggaccaggct
gatgcagaggtctttctcaatggaaaggctgaagagaaggaacagacgactcaggacatg
gagaaaccttctcaggacaacacactcaaggctgccgtgccagtgatgtgtgtttctgaa
gcgaccgaaaacagctcagccaggagtgtagaggcaagagccagcgagagtgaggaggcc
acagatgtattcagcagtcagttcgagagcatcctggagtcggagcgcctgtgtgttacg
ctctacagcagcctggactcactggacgctctcacgtcctcggctgacgagacggacgaa
caggctgtgccagcgcacgcacaccgggtcgtagagatgcccctcacgcccatgatccag
cagcggctgaaagaaagcggcctgtttatggaggcgagtagaaggcaggaagaggtgctg
agcgtcagtgtgaccgggaagagcgggaaagcagccctggaagtgacctcttccttcctg
aatacatccacggagcaagtggactcgattgccggacacacggatggagctttggccaac
ggcatgatggggaaggagacgagcgattggctgcagagctggacgagcagcgatgagggg
ttgaaagacgtgctgtcagactgggacttggacatgggcagcaccgagcgacagaaggac
agcacggacacactgaacaacgggcaccgcagcgaccaggaggcagcacgacgcctggcc
cgccgcctttaccacctggagggcttccggcgctctgacgtagccatgcacctgggcaag
aacaatgacttcagcaagatggttgccgaagagtacctcaccttctttgaattcacaggg
atgacgttggaccagtcactcagatcctttctcaaagcttttgcactaatgggtgaaacc
caggaacgagagcgggttttaatccacttttctaataggtactatcaatgtaaccccacc
atcctcgcctcacaagatgaagtgcattgccttacatgtgctttaatgctgctgaacagt
gaccttcatggacagaatattgggaagaagatgacgtgccaggaattcatcaacaacctg
gacggcctgaatgcaggacaagatttcccgcgagatctactcaaggcattgtacaactcg
atcaagaacgagaagctggaatgggcaattgacggggacgagttgaagaaatcgctgtct
gagctcgcggacacaaagaacgacaatgcccacacgaagagcatcagcaggatcagcagc
agcagcaaccctttcctggatatcgcccacgaccccaacgctgctgtttacaaagcaggc
tttctggctcgtaaaatccacgctgacatggatggcaagaaaacccctagaggaaaaaga
ggctggaagacattttatgctgttctcaaaggcatgatcctgtatttacagaaggatgag
tacaaacctgagaaggccctgtccgaggaggacctgaagaacgccatcagcgtgcatcat
gccctggccataaaggcagtagattacgagaagaagcccaacgtgctgaaactgaagaca
gccgactggagagtcttcctctttcaagcccagagccctgaggagatggagtcctggatc
agagtcatcaactcggtggctgccatgttttccgcaccctccttccccgctgccatcggg
tcacagaagaaattcagccgcccgctgctgccagccaccaccaccaggatgtcacaggag
gagcagctgaagtcgcatgaggccaagctgaagcacatctgcacagaattagccgagcac
aggtcctaccctccagacaggaaggtcaaagccaaggaggttgatgaataccgcctgaaa
gagcactacctagaatttgaggaaaaccgttacgagacgtacgtgaagctgctgaaggac
ggcgtgaaggaggttctgtctgctaaagagaacgatgcggctctgaagaaatcccagtcc
agcccacacctcaaccaggaatcccagccggccgcggccaagatcaagcgcaacacgtcc
gagaggaaggactaccgtcccgagacgcccaaagtcacatag
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