Ictalurus punctatus (channel catfish): 108276952
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Entry
108276952 CDS
T04658
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108276952
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108276952
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
108276952
NCBI-ProteinID:
XP_017344606
UniProt:
A0A2D0SPH3
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Position
16:complement(12875277..12928774)
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AA seq
882 aa
AA seq
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MKGGGGGKEVPAEGEVSAKQRPKRKCLQWHPLLSKKKALDFSEEEEDEDEEELEKVPVEC
PERSGQAPECVAMEDDGEEDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKIL
ADWWAVLEPSEKQKYTDMAKEYKDAFMKANPGYKWCPATSKPVKSPTHAVSNARKKAWSL
PSNNTKDITVAKKVPKTDSSPQLNFAMADPTKMGGLSMLLLAGEHALTAREISSSSSQSG
AGDVAKHTGKSALFQLAEISSCPPQIDGCKSSECRSAAAPQTEVCGLSQPNSPDLPSSCM
RSPLFQLAEISSSGSQASVSEVKQCGQSALFQLAEMCLASEAEKLEALSSQPAMDSSSLC
AQDSAPDTTPTVDLPTPTPPSSPPASCKKKKKPNDVAKGEKSPGSPKKPCKKRSSSGSDL
ESLMYTIEAVAKGAWGSEEMETTRKRARPSGGLSDQPSSAEKKKTKPKAKKQLRTKEDEE
ERGEGEDCKPLETEGSVLSHETELKTECKKEVDVKVDRAEDSEPHISTEQQISKGVEAGS
PLPNKGEEKDLEVKPVVIQTEERDIEPKPEACGSRKSERSCKGALYKTLVSEGMLTSLRA
NVDRGKRGSMRGAVSESEIGWTDESCNFSQPAASNPKKLKKSKSKEEPVPGNLGKLEEEF
EKKFNSLPQYSPLTFDKKSTAVTKRKKANVTNPLESPTPNKGPSPSQKKTLFHKIVSKYK
HKKEKAGTLEKAIAQPDPTASDTGTAKSDSSCASLATETRKMGDVPVGSQKRKARKSKIT
HLVRTADGRLSPAEADKVKELTQDQDGKPLTHETLCNTESCSTDPGPAESGSLPAFFSLA
ALAEVAAMENMHRGQRAVSVAAEGQVKDMAPQTPVLISCADQ
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcggaggaggggggaaggaggtgccggcggagggcgaggtgagcgccaagcag
aggcccaaacgcaagtgcctgcagtggcacccgctgctttccaagaagaaggccctggac
ttctccgaggaagaagaagatgaggacgaggaagagctggagaaggttccagtggagtgc
cctgagcgtagcggtcaggctcctgagtgtgtggcaatggaggacgatggtgaggaagac
tcttcggagcagcgtgctcgccggcccatgaatgccttcctgctcttctgtaagcggcac
cgctcattggtgcgccaggaacacccgagactggacaaccgcggagccaccaagatcctg
gcagactggtgggccgtgctggagcccagtgagaaacagaaatacaccgacatggccaag
gagtataaagatgcctttatgaaagcaaacccaggctataagtggtgtcctgccaccagc
aagccggtgaagagtcccactcatgcagtgagtaatgcgcgtaagaaggcctggtctctg
ccctccaacaacaccaaggacatcactgttgccaaaaaagtgcccaaaacagacagctca
ccacagctaaacttcgccatggcagatccgactaagatgggtggcctgagcatgctgctg
ctagctggggagcacgccctgactgccagagagatctcgtctagtagttcacagagcggc
gctggagatgttgcaaagcatactgggaaatctgcccttttccagttggctgagatttcc
tcctgtccaccccagattgacggttgtaaaagttcagagtgtcgaagcgcagcagccccc
cagacagaggtatgtggcctttctcagcccaactcgccagatttacccagcagctgcatg
cggtctcctctcttccagctggctgagatatcatctagtggttctcaggcttcagtatct
gaggtgaagcagtgcggccagtctgctctttttcagcttgcagagatgtgtttagcctct
gaagcagaaaaactggaggccctctcctcccaaccagccatggactcatcctctctctgc
gcccaggacagcgctcctgacacaacgcccaccgtggaccttcccacgccgacaccaccc
tcatcgcccccagcttcctgtaagaagaagaagaagccaaacgacgtggcaaaaggtgag
aaaagccctggctcgcccaagaaaccctgcaagaagcgttcttcatccggctcagacctt
gagagcttgatgtacactattgaggcggtggccaaaggagcctggggctcagaggagatg
gagacaaccaggaagcgggcacgtccgtcgggtggtctgtcggatcagccttcgtcagca
gagaagaaaaagaccaaacccaaagccaagaaacagctcaggactaaggaggacgaagag
gagaggggagaaggagaggattgcaagccactcgagacagaagggtctgtgcttagccat
gaaacggaactgaaaaccgagtgcaagaaggaagtggacgtcaaagtggaccgagcggag
gactcggagccacacatctctacagaacagcaaatcagcaaaggtgtagaagcgggctcc
ccactgccaaacaaaggagaagagaaggacctggaagttaagccagttgtaattcaaaca
gaagagagggacatcgagcccaaacctgaagcctgtggatcccggaaatcagagcgaagc
tgtaagggagctctgtacaaaactctggtgtctgaaggaatgctgacatcactgcgggcc
aacgtcgacagaggaaagaggggctccatgcgtggcgccgtgtccgagtcggagatagga
tggacagacgaaagctgcaatttcagtcaacctgctgccagcaaccccaaaaaactgaaa
aagtccaaatccaaagaggagccagtgccaggcaatttaggaaagctggaagaggagttt
gagaagaagtttaacagcctgccccagtacagtccactgacgttcgacaaaaagagcaca
gctgtcaccaaaaggaagaaagccaacgtaactaaccctctggaaagtcctacgcctaat
aagggtccatccccatctcagaaaaagactttattccacaagattgttagcaagtacaag
cacaaaaaggaaaaggctggaactttggagaaagccatagcacagcctgacccaacggcc
agtgacacaggcacagcgaagtcagactcctcgtgtgcttctcttgctacggagacccgt
aagatgggtgatgtgcctgtgggaagccagaagaggaaagccagaaaaagcaaaatcact
catttggtgcgcacggccgatgggcgtctatcacccgctgaggcggacaaagtgaaggag
ctgacccaggatcaggatggaaagccattaactcatgagactttatgcaacacagagagc
tgctccactgaccccggaccggccgagtctggcagcctgccagccttcttcagcctagca
gccctcgccgaggtcgctgccatggagaacatgcatcgaggccagcgagcagtgagcgtg
gctgctgaaggtcaggtgaaggacatggctcctcagactcctgtgctgatctcttgcgct
gatcagtga
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