Ictalurus punctatus (channel catfish): 108276962
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Entry
108276962 CDS
T04658
Name
(RefSeq) nuclear pore complex protein Nup155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108276962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108276962
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108276962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
HTH_Tnp_1_2
WD40_2
Motif
Other DBs
NCBI-GeneID:
108276962
NCBI-ProteinID:
XP_017344643
Ensembl:
ENSIPUG00000004317
UniProt:
W5UDK4
LinkDB
All DBs
Position
16:complement(1521255..1534801)
Genome browser
AA seq
1391 aa
AA seq
DB search
MPSSLGPSSVAAALQEALENSARLIDRHLQEDRCFPDLSELLNVPSHNMPSLSGVSDMDY
PLQGPGLISVPNLPELSAVRRVPLPPELVEQFSHMQCNCMMGVFPEISRAWLTIDNDIFM
WNYEDGGDVAYFDGLSETILSVGLVKPRAGIFQPHIHFLLVLATPVDVVILGLSFPKAQA
GLNDSMSGAMQLLPDPLYSIPTDNTYMLAITSTDLGRIFLAGKDGCLYEIAYQAEAGWFS
QRCRKINHSKSSLSFLIPSLLQFSFSEDDPVVQIAIDNSRNTLYTRSEKGVLQVYDLGAD
GQGMSRVAAMSQNAIVSAAGNIARTIDRSVFKPIVQIAVIDRSESSDCQLMAVTHAGVRL
YFSTSPFAPPNARQSVSRSSFLALVHVRLPPGFSASSTLQKPAKVHKALYNKGVLLMAAS
ETEDSDILWCINHDSFPFKKPLMEAQITSNVDGHSWALCAIEEMKVSKIVTPLNKDLIPL
TDSPVVVQQHNIPPQKFVLLSAQGSHIFHKLRPVDQLRHLLVSSNGGESDEIERFFKLHR
EEQACATALILACSTAACDREVSVWATRAFFRYGGEAQMRFPSAMSAPSNVGPLLGSPVP
GSPMPVGSPFPNPSFLATPAPGMMPPSVSTPFIPATPMSPGSTVIPALSSGPEVLFSGKH
NGIVIYFSRILGNIWDGSLVLEQPISKGIQTVIVMESTASSSDLEAVLMELQGLKEFIDK
NSQFSPTSLGAASFSSPANLQQRLLGFMRPDGASSQQVQQELQRKYHTEAQVYEKTSLQG
VQQLVHRSFQTLALWKLLCDHQFSLIISELPKDFLEQLKAISFKDMVNRGRELTGALITA
LINVYIKDSASVDAISTLLREICPLLYSSDDSVCSKANELLQASRQIQSKAEKERMLKES
LRLYQQISNHTDLPLVCSQYRQVRFYEGVVELCLTAADKKDPQKLGPHFYKNGEPEEDAV
GQQAFQERLSCYKCVTDTMQELVNHSKAAPQSPSVPKQPGPPVMTSDPNMLSNEDAATHF
EQMLGLAQRSQDELFHIALYNWLIQADLTDKLLEVNSQYLEEHLMHMIKQDQSKVRNMDL
LWRYYEKNRSFGKAAHVLARLADMHSTEISLQQRLEYISRAILSAKSSSCISSMGADGEF
LHELEEKMEVVRIQVQIQETLRRQYSHHPSVHGAISQLDSELMDITKLYGEFADHFRLSE
CKLAIIHCAGHSDPILVHSLWQEIMEKELSDSVAMSPADRMRALNLKLISLGKLYAGTPR
YFPLDFLVKFLEQEVCKLNWDVGFVTVTMQEIGVQLPRLLEVYDQLFKARDPCWQRLKKP
LHLVECIHVLLSGYVDDPSRVPTYDRRRFTNVCLDNICGYLVELQSLSPSVALEEIIRNF
KSLQAKLEKLH
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgccttccagcttgggccccagcagtgtggcagctgcgctgcaagaggctctggagaat
tcagctcgactgattgaccgtcacttgcaggaagaccgctgttttcctgacctgtccgag
ttgctcaacgtgccctcgcataatatgccctctctgtctggtgtgtctgacatggattac
cctctacaaggccccggtcttatcagcgtgccaaatttaccagagctgagcgccgtccgc
agggtccctctgcctccagagctggtggagcagtttagccacatgcagtgcaattgcatg
atgggtgttttccccgagatcagcagggcgtggcttacgatcgataacgatatattcatg
tggaactacgaggacggtggcgatgtggcgtatttcgatgggctcagtgaaactatcctt
tcggtcgggctggtcaaaccaagagcagggatttttcagcctcacatccacttcctgctg
gtgctggctacacctgtagatgttgttatactgggactgagcttccctaaggctcaggca
ggtttaaatgacagcatgtcaggagccatgcagctgctgcccgacccgctctactccatc
cccacagacaacacctacatgctcgccattacctctacagacctgggccgcatcttcctg
gccgggaaggacggctgcctgtacgaaatcgcctaccaggctgaagctgggtggttcagt
cagcgctgcaggaagatcaaccattccaagagcagcctgtccttcctaattccatctctg
ctgcagttctccttctcggaagacgatccggtggttcagatcgccatcgacaattcacgc
aacactctgtacacgagatcagagaaaggtgtgctgcaggtttacgatttgggagccgac
ggccagggaatgagccgggtggcagccatgtctcagaacgctatcgtttcagctgccggg
aacatcgccaggacgatcgatcgttctgtcttcaaacccatcgtccagattgccgtcatc
gatcgttccgagtcgtcggattgccagctcatggctgtgacgcacgcgggcgtacgtctg
tacttcagcaccagtccgttcgctccacccaacgccaggcagagcgtttcccgatccagc
ttcctggctctggttcacgttcggctgccgccgggattctcggcctcgtccaccctgcaa
aaacccgccaaagtacacaaggctctctataacaaaggcgttctgttgatggcagcatcg
gagacggaggacagcgatattctgtggtgtataaaccacgactccttcccctttaagaag
cctcttatggaggctcagattacctcgaatgtagacggtcactcgtgggcactctgtgcc
atcgaagagatgaaagtgtccaaaattgtcacgccgttaaataaggacctcatcccactg
acagattctccagtggtggttcagcagcacaacatcccacctcagaaatttgtcctcctc
tctgcccagggaagtcatatattccataagctgagaccagtggatcaattgcgccatctg
ctggtgagcagcaacggtggggagagtgatgaaattgagcgattcttcaagctccataga
gaggagcaggcctgtgctaccgctctgatcctggcctgctccactgccgcctgtgacaga
gaagtttctgtgtgggctactcgagctttcttcaggtatgggggagaggctcaaatgcgg
ttcccttctgccatgagtgcaccgagcaacgtcggacctctcctcggctcacctgtgccc
ggatctcctatgcctgttggtagtccttttcctaatcccagtttcctagctacaccagcc
ccaggtatgatgcctcctagtgtgtccactcccttcatccctgccacgcccatgagcccc
ggcagcaccgtcatacccgcgctgtcctccggtcctgaggtccttttctctggcaaacac
aacggcattgttatctacttctcccgcatactcggaaacatctgggacgggagcctggtg
ttggagcagccgatcagtaaaggaatccaaactgtgattgttatggagagcacggcaagt
tcttccgacctggaggcggttctgatggagctccaaggcctgaaggagttcattgacaag
aactcgcagtttagccccacgtccttgggcgcagccagtttcagctctcctgccaacctg
cagcaaaggctactgggattcatgcgtccagacggcgccagctctcagcaagtccagcaa
gagctccagaggaaataccatactgaagcccaggtctatgagaagacgtctctgcagggc
gttcagcagctggtgcaccgctcctttcagactctggcactctggaagctcctctgcgac
caccagttcagtctcatcatctctgaactgcccaaggacttcctggagcagctgaaggcc
atcagctttaaggacatggtaaaccgtggccgtgagctgaccggtgcgctcatcaccgcc
ctcatcaacgtctacatcaaagacagcgcctctgtggacgccatcagcaccctcctacga
gaaatctgtccccttctgtacagcagtgatgacagcgtgtgctccaaggctaacgagcta
ctgcaggcctcgaggcagatccagagcaaggccgagaaggagcgtatgctcaaggagtca
ctgcggctgtaccaacagatcagcaatcacacggacctgccactcgtgtgttcacaatat
cgacaagtgcgtttctacgagggcgtcgtggagctgtgccttacagctgctgataagaaa
gacccccagaagttgggtcctcacttctataagaacggagagcctgaggaggatgctgtt
gggcagcaagcctttcaggaaaggctttcgtgttataaatgcgtcacggacaccatgcag
gagctggtaaatcacagcaaagcggctccacagtcccccagtgtgcctaagcagccgggg
cctccggttatgacctctgaccccaacatgctcagcaacgaggatgctgccacccatttt
gagcaaatgcttggcctagcacagaggtcgcaggatgagctgttccacatcgccctgtac
aactggctgatccaggctgacctcactgacaaactcctggaggtcaactctcaatatctc
gaagagcatttgatgcacatgatcaagcaggaccagagcaaagtgcgcaacatggacctc
ctgtggcgatactatgagaagaatcgcagctttggaaaagcggctcacgtcctggcccgt
ctggccgacatgcacagcacagagatctctctacagcagaggctggagtacatctcccgg
gccatcctttcagccaagagttcgtcctgcatctcgtcgatgggagccgacggagagttc
ctgcatgaactggaagagaagatggaggtggtgcggattcaggtgcaaatccaggagacg
ttgagaaggcaatactcccaccacccgtctgtacatggagcgatatctcagctggattcg
gagttaatggacatcactaagctttatggagagtttgcagaccatttccggttgtccgag
tgcaagctggccatcattcactgtgctggccactcggaccctattctggttcactctctg
tggcaagagatcatggaaaaagagctgagcgacagcgtggccatgagtccagcggaccgc
atgcgagccctgaatctgaagctgatctctttagggaagctgtatgcagggacaccacga
tattttccactggacttcctggtcaagtttctggagcaggaagtgtgtaagctgaactgg
gacgtgggcttcgtcaccgtcacgatgcaagagatcggcgtccagcttccacgtctgctg
gaagtatacgatcagctcttcaaagctcgggacccgtgttggcagcgtctgaagaaaccc
ctgcaccttgtggagtgcatccacgtgctcctgtccggttacgtcgacgaccccagccga
gttcccacttacgacagacggaggtttaccaacgtctgcctggacaacatctgcggctat
ctggtggagctccagtccctgagccccagcgttgccctggaggaaatcatacgcaacttt
aaatctctacaagccaagctggagaaactccactga
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