Ictalurus punctatus (channel catfish): 108277045
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Entry
108277045 CDS
T04658
Name
(RefSeq) UV radiation resistance-associated gene protein isoform X1
KO
K21249
UV radiation resistance-associated gene protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108277045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108277045
Membrane trafficking [BR:
ipu04131
]
Autophagy
Other autophagy associated proteins
Others
108277045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG14
VPS38
C2
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-GeneID:
108277045
NCBI-ProteinID:
XP_053542585
Ensembl:
ENSIPUG00000018829
UniProt:
A0A9F7RCG2
LinkDB
All DBs
Position
16:complement(4825152..4885656)
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AA seq
677 aa
AA seq
DB search
MMNSVWDLALGSTPVSNPGAAASRSVHVELTSQQRRLRHLRSIAARNIVNRNHSPLLDTY
FTLHLCSGKDRISRDFYKSEVIRDSLNPTWRSLDFAMLPDLWDTSVSCFVVRIWGGREEQ
YQLLIEWKVNLDGLRYTGQQIRSRCPNEIIFGLNDGYYAADLDQKENSEKKKNSLLQVDQ
SSVRNSYSVFSLLRLHTAQKAIKQTQVTVQKIGKEIEEKLRTTAACTERKKERECMQLRI
GVLRSEVERQRKALLREREALQKERVLLQKKEEAFSCKHQTLDLERDTLTDLQKDSTAKR
ELFLKSSAQLTFRCRQLLSELSYIYPIDTNSQSDFVICGVKLPNSEDFQAKDDGSLAVAL
GYTAHLVLMISCFLQIPLRYPIMHRGSRSSVRDTITDKLSEKEREFPLYPRGERFHFEYG
VYLLNKNIAQLRYQHGLSTPDLRQTLPNLKNFLEHGLLVRCDRHHVSSSIPVPVRSHLSV
SQVSFPESPEEGKKKRRSHKLYDPVVTPIPVTSAIQEAPPDRLDVSVELENSLEEDGRAE
AAGTSTPEPKSEQYDPDAEKIPEREPELSGEPSKPECVEENLQHQGAMNGSAGVTVGAEV
CCSVEQAEEIMGTEATGLGLGSRLEDFPSIPVEHAVAVESDDQVLGELENFEEFSKRIYA
LSENPSSFRRPRKNSDK
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgatgaactcggtttgggatcttgctctcggatccactcctgtcagtaatcccggagct
gcagcttcccgatccgtgcatgttgagctcacatcccagcagaggcgtttgcggcacctg
aggagcatcgccgcgaggaacatcgtgaacagaaaccactctccgctgctggacacctac
ttcacactgcacctgtgttcaggcaaagatcgcatctctagagatttttacaagagtgag
gtgatccgagactcgctgaacccgacatggcgcagtttggacttcgccatgctgccggac
ctgtgggacacgtctgtgtcgtgtttcgtggttcggatttggggcggacgagaggaacag
taccaactgctgatagagtggaaggtgaacctggatggcctgagatacactggacaacag
atccggtctcggtgtcctaatgagatcatatttgggctgaatgatggttactatgcagca
gatttggatcagaaggagaactctgagaagaagaagaactcgttactgcaggtggaccag
agctctgtgaggaactcgtacagcgtcttctccctcctcagactccacacggctcagaag
gcaataaaacagacgcaggttacagttcagaaaatcgggaaagagattgaggagaagctt
agaactacagcagcctgtacagaacggaagaaagagcgtgagtgtatgcagttgcgtatc
ggtgtgttacggagcgaggtggagagacagaggaaagctctgctgagagagagggaggcg
ctgcagaaagagagagtgctgcttcagaagaaagaggaggcgttcagctgtaaacaccag
actctggatttggagcgagacactctcactgatctacagaaggacagcactgctaaaaga
gagctgttcctgaagtccagcgctcagctcacgttccgctgtcgtcagctcctctctgaa
ctctcctacatctaccccatcgacacaaacagtcagtcggactttgtgatctgtggtgtg
aaactgccaaactctgaagactttcaagcaaaggatgatgggagtcttgcggttgccctt
ggctacacggcgcacctggtgttgatgatttcctgcttcctgcagattccactcaggtat
cccatcatgcaccggggctctcgctcgtccgtccgagacaccatcaccgacaagctcagc
gagaaagagagagagttccctctttatccacgcggagagagattccacttcgagtacggt
gtttacctgctcaacaagaacatcgctcagttgcggtatcagcacggtctctccacacca
gacctgcgtcagactttacccaacctcaagaactttctggaacacgggctgctggtcaga
tgcgatcgccatcacgtctccagctcgatcccggtccccgttagatcccacctgagcgtc
tcgcaggtttcttttcccgaatctccggaagagggcaaaaagaaacgcaggtcgcataaa
ctctacgacccggtcgtgacccctatcccggtcacctcggcgatccaggaagctccgccc
gaccgtctggacgtcagcgtggagctggagaactcgctggaggaggacgggcgagcggaa
gctgctggaacgtcgacaccagagccgaaatccgaacagtatgatccggatgcagagaag
attccagagagagaaccggaactgtccggagaaccgagcaagccggaatgcgtggaggaa
aatttgcagcaccaaggcgccatgaacggttccgccggtgtaacggtcggcgccgaggtg
tgctgctccgtggaacaggccgaggagatcatgggtaccgaggcgacgggattaggatta
ggatcacggctggaggatttcccgagcatccccgtggagcatgccgtggccgtagagagc
gacgatcaggttctcggagaactggagaactttgaggagttctcaaaacgtatctatgct
ctgagcgagaacccgtcctccttcagacgtccacgcaaaaactctgataaataa
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