Ictalurus punctatus (channel catfish): 108277061
Help
Entry
108277061 CDS
T04658
Name
(RefSeq) ras-related protein Rab-6A isoform X1
KO
K07893
Ras-related protein Rab-6A
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108277061
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108277061
04031 GTP-binding proteins [BR:
ipu04031
]
108277061
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
108277061
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
108277061
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108277061
Exosomal proteins of bladder cancer cells
108277061
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
108277061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
SRPRB
MMR_HSR1
RsgA_GTPase
FeoB_N
Gtr1_RagA
CPT
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
108277061
NCBI-ProteinID:
XP_017344857
Ensembl:
ENSIPUG00000021740
UniProt:
A0A2D0SQ82
LinkDB
All DBs
Position
16:1654799..1666009
Genome browser
AA seq
283 aa
AA seq
DB search
MPSLSDGVGIRHLEVISNFTPTSTEFRNIYIYTHIYILNIKNNLNQRQLASKPEIKRGLK
TSTLIAVCNIFHRAVMSTAGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQAT
IGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTT
KWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQ
LFRRVAAALPGMESTQDKSREDMIDVTLQNPPEQPVSESGCSC
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtctgagcgatggagtcggtatcaggcatctcgaagtgatctcaaacttcact
ccgacttcaacagaatttaggaatatttatatatatacacatatttatattcttaacatt
aagaacaatttgaatcaacggcagctagctagcaaaccggaaatcaaacgaggattaaaa
actagcacccttatcgcagtgtgtaatatcttccaccgagccgtcatgtctactgcagga
gactttgggaacccgttaagaaaattcaaactggtgtttcttggggagcaaagtgtcggg
aagacttcactcatcaccagattcatgtacgacagcttcgataacacctaccaggccacg
ataggaatcgatttcctgtcaaaaacgatgtacctcgaggaccgaacaatcaggttgcag
ctgtgggacacggcgggccaggagcgattccgtagcctcattcccagctacatccgtgac
tcggccgctgccgttgtagtgtacgacatcacaaacgtcaactccttccagcagaccacc
aaatggatcgacgatgtcaggacagagagaggaagcgacgtcattatcatgctggtcggg
aacaagaccgatctcgcagacaaaaggcaagtatctatcgaagagggtgagaggaaagcc
aaagagctgaacgtgatgtttattgagaccagcgccaaagccggctacaacgtgaagcag
cttttccggcgtgtggctgccgccctgcctggcatggagagcacacaggacaagagcaga
gaagacatgatcgacgtgacgctgcagaatcctccggaacagcctgtgagcgaaagcgga
tgctcctgctaa
DBGET
integrated database retrieval system
