Ictalurus punctatus (channel catfish): 108277088
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Entry
108277088 CDS
T04658
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108277088
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108277088
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108277088
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108277088
Ubiquitin system [BR:
ipu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108277088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UBA_4
UIM_2
PhnI
Motif
Other DBs
NCBI-GeneID:
108277088
NCBI-ProteinID:
XP_017344942
Ensembl:
ENSIPUG00000021024
UniProt:
A0A2D0SQG8
LinkDB
All DBs
Position
16:complement(2543520..2570182)
Genome browser
AA seq
1154 aa
AA seq
DB search
MTVEQNVLQQHSQKHQQTLLNQLKEVTGTTDVQLLQQALQVSNGDLAEAVAFLTEKNAKV
PQQDEATYYQTAQIGNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESSRAFRETG
ITDEEQAISRVLEASIAENKASLKRTHTEVWSDSPNPHDRKRLGNCPVGLKNVGNTCWFS
AVIQSLFNLLEFQRLVLNYSPPTRVQDLPRNQKEHRNLPFMQELRNLFSLMVGSRRKYVD
PSKAVEILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQMKAEEDREDEKPKNPMVELFYG
RFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMVEGEIESLHSAENSAKSGQE
HWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPRMLYMDRYMDRNREITRIKREEIR
RLKEHLTVLQQRLERYLSYGSGPKRFPLADVLQYAMEFASSKPVCSSPIEDFDTSAPPGG
TTALVPPAPSVAEQGPSAPPDSSGASPQPQPQPQQQRVSIHKPFTQSRVPSDLPMHPAPR
HITEEELHVLEGCLHRWRSEVENDTRDLQGSISRIHRTIELMYSDKTMMQVPYRLHAVLV
HEGQANAGHYWAYIYDPQHGCWMKYNDISVTKSSWEELVRDSFGGYRNASAYCLMYINDK
KPFLVQEEFDKETGQVLSGLDKLPLDLKLYVKEDNQHFERELEEWDAIQARKAQQEKLAM
AAAAAAAAASPRPTSTETSPAENTACQQDPDYMEQPSPTDDSKHLQEDTERAINKAAAEQ
DEKNPEDLLYAAKSHASPAQTPPPDPAQDGSASTAVTPHRVVEVAIPHVGTFVIQSREGG
YDDETMMTPNMQGIIMAIGKARSVYDKSGPEAAFFKAIKVEYTRLVRLAQEDTPPQNDHR
LQHIIVYFIQNQAPKKILERTLLMQFADRNLGFDERCKSIMKVARAKLELIKPDEVNMEE
YEMWHQDYRNFRETTIFLMIGLEMFQKKSYVEALMYLVYSYQYNKELLSKGPYRGHDEEL
IGHYRRECLLKLNEQAAAMFESGEEPEVNDGLSIMNELVVPCIPLLLLEEMEEKDMVAVE
DMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIRSFSEPPKLPLYSTLELCERFGRA
MASLTLSRTPADGR
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggagcagaatgtcctccagcagcactctcagaagcaccagcagacgttactg
aatcagctgaaggaagttactggaactacagatgttcagctgttacagcaggccctacag
gtcagcaatggtgacctagccgaggcggtagcctttcttacagagaagaacgccaaagtc
cctcaacaggatgaagccacctactatcaaaccgcgcagatcggcaacgacagatacatc
agcgtgggcagccaggccgacaccaatgtgatcgatctgaccggagatgataaagatgac
cttcagagagccatcgcgctcagcctggaggagtccagccgggccttcagagagacgggc
atcacggacgaggagcaggcaatcagcagggtgttggaggcgagtatagcggagaacaaa
gccagcctgaagcgcacacacacggaggtgtggagcgactcgcccaaccctcacgacagg
aagcggctgggtaactgccccgtaggcctgaagaatgtgggcaacacctgctggttcagc
gccgtcatacaatcattgtttaacctgctggagttccagagactggtgttgaactactct
ccacctactcgagtccaggatttaccccgaaaccagaaggagcacaggaacctgcccttc
atgcaggagctgaggaatctcttctccttgatggtgggatccaggaggaaatacgtcgac
ccgtccaaggccgtcgagatcctcaaggatgcctttaagtccagcgagtcgcagcagcag
gatgtaagtgagttcactcacaaactgctggactggctggaggacgcgttccagatgaag
gcagaggaagacagagaggacgagaagccgaagaacccgatggtagagctgttttatggg
cgcttcctggctgtaggtgttctcgaaggaaagaagtttgagaacactgagatgttcgga
cagtacccgctacaggtaaacggcttcaaagacctgcacgagtgcttggaggccgccatg
gtggagggcgagatcgagtctctgcattctgctgaaaactctgccaaatctggacaggag
cactggtttactgaacttcccccagttttgaccttcgagctgtcacggttcgagtttaac
caggctttgggccgacctgagaagatccacaacaagctggagttcccccgaatgctctac
atggacaggtacatggacaggaatcgtgaaatcacacggatcaagcgggaggagatcagg
agactgaaggagcacctgaccgtccttcagcagcggctcgagaggtatctcagttatggc
tcgggtcctaagaggtttcctcttgcagatgttcttcagtacgccatggagttcgcctcc
agcaagcctgtgtgctcttctcccatcgaggacttcgatacgtcagcgccacctggtggc
acaacagcactggtgcctcctgcgccaagtgtggcagagcagggcccttcagcccctcca
gacagctccggggcttctcctcagccgcagcctcagcctcagcagcagcgcgtgtccatc
cacaagcccttcacccagtcacgtgtgccctcagaccttcccatgcaccccgcaccccgc
cacatcacggaggaggagctgcacgtgctcgagggctgcctgcaccgctggaggagcgag
gtggagaacgacacgagagatctgcaagggagtatatcaagaatccacagaaccatcgag
ctcatgtactcagacaagacgatgatgcaggtgccgtaccgcctgcacgcagtcctggtg
cacgagggccaggccaacgcaggccactactgggcgtacatctacgacccgcagcacggc
tgctggatgaaatacaacgacatctcggtgaccaagtcgtcgtgggaggagctggtcagg
gactcgttcggcggctaccgcaacgccagcgcgtactgcctcatgtacatcaacgacaag
aaacccttcctggtccaggaggagtttgataaggagacaggccaggtgctgagcggtcta
gataagctgcctctggacctgaagttgtacgtgaaggaagacaaccagcatttcgagcga
gagctggaggagtgggacgccattcaggccaggaaagcccagcaggagaagctggccatg
gccgcagccgccgccgcggctgccgcgtctcctcgtcccacgagcaccgagacgagccct
gccgagaacacggcttgccagcaggatcccgattacatggagcagccgtcgcccacggat
gactccaaacacctgcaggaggacacggagagagccatcaacaaagctgcagctgaacag
gatgagaagaatcccgaggatctgctttacgctgcaaagtcccacgcatcccctgcccaa
acccctccccctgatcctgcacaggatggctctgcctccaccgcggtcactcctcatcgg
gtggtggaggtggccatccctcacgtaggaaccttcgtcattcagtcccgagaagggggg
tacgatgacgagacaatgatgactccaaacatgcagggtattataatggccattgggaaa
gccaggagtgtgtatgacaagtctggtcccgaagcagccttcttcaaggcgattaaagtc
gagtacactcgtttggtgcggttagcgcaggaagacacgccgcctcagaacgaccatcgg
ctgcagcacatcatcgtttacttcatccagaaccaggcgcccaagaagatcctggagaga
accctgctcatgcagttcgcagacagaaacctcggctttgacgagagatgtaagagcatc
atgaaggtggcgcgggccaagctcgagctcatcaagcctgacgaagtcaacatggaggag
tacgagatgtggcaccaggactacaggaacttccgcgagaccacgatcttcctaatgatt
ggccttgagatgtttcagaagaaaagttacgtggaggcgttgatgtacttggtgtactcg
tatcagtacaacaaagagctgctgtccaaagggccgtaccgagggcacgacgaagagctc
ataggccattatcgcagagagtgcctgctgaagctgaacgagcaagcggcagccatgttc
gagagcggcgaggagccggaagtgaacgacggcctgagcatcatgaacgagctggtggtg
ccgtgcatccctcttctgctgctcgaagagatggaggagaaggacatggtagccgtggag
gacatgaggaaccgctggtgctcgtatctgggacaggagatggaacctaatcttcaggag
aaactgaccgatttcctccccaagttgctcgactgctctacagagatcaggagcttctcc
gagccgcccaagcttcctttatactccaccctggagctgtgcgagcgcttcggccgtgcc
atggcctccctcacactcagccgaacgcccgccgacggcagatga
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integrated database retrieval system
