Ictalurus punctatus (channel catfish): 108277129
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Entry
108277129 CDS
T04658
Name
(RefSeq) short transient receptor potential channel 7a
KO
K04970
transient receptor potential cation channel subfamily C member 7
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108277129
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108277129
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_5
DUF6744
Motif
Other DBs
NCBI-GeneID:
108277129
NCBI-ProteinID:
XP_017345016
Ensembl:
ENSIPUG00000020244
UniProt:
A0A2D0SR83
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Position
16:3781391..3790102
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AA seq
899 aa
AA seq
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MSRGSSELQRAGGRPELLLLHALPLNAQVDFEYSACGDHLPGHPVHPHAHFPDAHHAYEA
MQRRHTTLREKGRRGPAYMFSERDTSLTAEEERFLDAAEYGNIPVVRKMLEDSETLNVNC
VDYMGQNALQLAVANEHLEVTELLLKKEGLARVGDALLLAISKGYVRIVEAILAHPAFEG
GLRFAPTILEREQKNEDDDFYAYDEDGTRFSRDVTPVILAAQCQEYEIIHTLLVKGARIE
KPHDHFCKCAECAEKQKQDSFSHSRSRMNAYKGLASAAYLCLSSEDPVLTALELSNELAQ
LANVETEFKNDYRKLSMQCKDFVVGVLDLCRNTEEVAAILNGSVDHNLASDHSRPCLSRI
KLAIKFEVKKFVAHPNCQQQLLTLWYENLSGLRQQSIGVKCLTVLGVMVALPFLAIAYWI
MPYSKLGQMLRSPFMKFVAHAVSFTIFLCLLVLNASDRFDGVKNLPNETITDHPRQIFRV
KTTRFSWTEMLIMKWVLGMIWSECKEIWEDGLREYITQLWNILDFGMLSIFVASFTARLM
AFLQASRAQLYVDLYVTNPVLSNASLPVDVAYFTYARNRWLPSDPQLISEGLYSIAVVLS
FSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFLAFMIGMFNLYSYYLGAKYNP
AFTTVEESFKTLFWSIFGLSEVISVVLKYDHKFIENIGYVLFGVYNVTMVIVLLNMLIAM
MNHSYQEIEEDADVEWKFARAKLWLSYFDEGRTLPPPFNLVPSPKSFYYMGLRTRSCLVR
LCKAKGRRGSQQDMETPNSISKLHRYRPCHAQDEYAMTTSIKHPTKYQKIMKRLIKRYVL
KAQTDSENDEVNEGELKEIKQDISSLRYELLEEKSQATAELADLIQQLGDRLSNSTKKS
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtggaagctcggagctacaaagggcgggcggcagaccggagctgcttctcctc
cacgcgcttccgttaaacgcacaggtggatttcgagtacagcgcctgcggtgatcacctg
ccgggccatccggttcacccacacgcgcactttccggacgcacatcacgcgtatgaagcc
atgcagcgcagacacacgacgctgagggagaaaggtcgcagggggccggcatacatgttc
agcgagcgcgacacaagtctcacggccgaggaggagcgcttcctggacgccgcggagtac
ggaaacatcccagttgtacggaagatgcttgaagactctgagacgctcaacgtgaactgc
gtggactacatgggccagaatgctctgcagctcgccgtggccaacgagcacctggaagtg
accgagctgctcctgaagaaggaaggtctagcacgggtgggtgatgccctactcctggcc
atcagtaaaggctacgtgcgcatcgtggaggccattttagcacatccggctttcgaaggc
ggcctccgctttgccccgactatcttggaacgggaacagaaaaacgaagacgacgacttc
tacgcgtacgacgaggacggaacacggttctcacgtgacgtgacacccgtgatcctggct
gcacagtgtcaggaatatgagatcatacacacgctgctggtcaaaggtgcacgcatcgaa
aagcctcacgatcacttctgcaagtgcgccgagtgcgccgagaaacagaagcaagactcc
ttcagccactcgcgctcacgtatgaacgcctacaaaggcctggcgagtgccgcctacctc
tgcctgtccagtgaagatccggtgctgacagccttggagctcagcaacgagcttgcgcaa
ctcgccaacgtcgaaaccgagtttaagaacgactacagaaaactgtccatgcagtgtaaa
gactttgtggtcggggtgctggatctgtgtcgaaacacagaggaggtcgcggccattctg
aacggaagcgtggaccataacctggccagtgaccacagcagaccctgcctgagccggata
aagctggccatcaagtttgaagtcaaaaagtttgtggctcatccgaactgtcagcagcag
ctcctgacactgtggtatgaaaatctgtctggtttgaggcaacagtctattggagtgaag
tgtttaacggttctcggggtgatggtggctctgccgttcttggccatcgcatactggatt
atgccgtacagcaagctgggtcagatgctacgcagtccattcatgaaattcgtcgcccat
gcagtgtccttcaccattttcttgtgcttgctggtgctcaatgcttccgatcgctttgat
ggagtcaaaaatctgcccaacgaaacgatcactgatcatccgcggcagatcttcagggtc
aaaaccacccggttctcctggacggagatgctcattatgaaatgggtgcttggaatgatc
tggtcagagtgtaaagagatttgggaggacgggttgcgtgaatatatcacgcaactttgg
aacattttagacttcggcatgctgtccatctttgtggcgtcgttcacggcgaggctcatg
gcattcctgcaagcctcccgagcacagctgtatgtcgacctgtatgtgacgaacccggtc
ctgagcaacgcctcgcttcctgtagatgtggcctacttcacttacgcgaggaaccgctgg
cttccctctgacccccagctcatctctgaaggtctctactccattgctgtggtcttaagt
ttctcacgcattgcctacatcctgccggccaacgagagcttcggacctttacagatctcc
ctgggccgcaccgtgaaggacatttttaagttcatggtcatctttatcatggtcttcctt
gccttcatgatcggcatgttcaatttgtactcctactacctgggcgcaaagtataaccca
gcgttcactacggtagaagaaagtttcaagacactgttctggtccatcttcggtttgagt
gaggtgatctctgtggtgttgaagtacgatcataagttcattgagaacatcggctacgtc
ctgttcggcgtctacaatgtcacaatggtgattgtgctgctcaacatgctgatcgccatg
atgaaccactcctaccaggagatcgaggaggacgcagacgtcgagtggaagtttgcccgt
gctaagctctggctttcctacttcgatgaaggcaggactcttcctcctcctttcaatctg
gtgcccagtcctaagtccttctattacatgggcctacgcacaagatcttgcctcgtcagg
ctatgcaaggccaaaggtcgtcgtggaagccagcaagacatggaaactccaaattctata
tctaagctccacaggtatcgaccgtgccatgctcaagatgaatacgcaatgacaacttct
atcaaacatccaaccaaataccagaagatcatgaagcgcctcattaaacgatatgtcctg
aaggcccaaactgacagtgaaaacgatgaggtcaatgagggtgagctgaaggagataaag
caggacatctccagtctacgctatgagcttctggaggaaaaatctcaggccacggcagaa
cttgccgatctcatccagcagctgggtgatagactcagtaattcgaccaagaaatcctga
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