Ictalurus punctatus (channel catfish): 108277152
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Entry
108277152 CDS
T04658
Name
(RefSeq) claudin-23
KO
K06087
claudin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03272
Virion - Hepatitis viruses
ipu04382
Cornified envelope formation
ipu04514
Cell adhesion molecule (CAM) interaction
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108277152
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108277152
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108277152
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108277152
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108277152
04147 Exosome [BR:
ipu04147
]
108277152
Cilium and associated proteins [BR:
ipu03037
]
Other cilia and associated proteins
Stereociliary proteins
108277152
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
108277152
Exosomal proteins of colorectal cancer cells
108277152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DMT_YdcZ
Motif
Other DBs
NCBI-GeneID:
108277152
NCBI-ProteinID:
XP_017345086
Ensembl:
ENSIPUG00000024815
UniProt:
A0A2D0SRF6
LinkDB
All DBs
Position
16:complement(21003849..21005598)
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AA seq
270 aa
AA seq
DB search
MRTPGILIIGLVLAPCGWILNLTSTVAPNWRQLYSIASQPSDTVINQGIWDICQSSSTTT
NVICNLRGNDPVYFKNQIIPIAQGMMIASLIVTAIGLVVLTPAVRCWTDRPPRWTIAGIG
GLLIFCSGVLTIIPIAWYTHILTSLNTTTTFINPQSPDIRVGYCIVLGYIGGIMEVLGGL
SICVGFCRCCGGRNRGENPQPVRAPRTTTRAPNPIPYPRTNLPRSVTPSSSSVPYSRDSL
DEDLDYPRAKNQKRGTVNPSYNGRPYDADL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaggacaccggggattttgatcatcggactggtgcttgcgccctgcggatggatcctg
aacctgaccagcacggttgcgcccaactggcgccagctctatagcatcgccagccagccc
tccgacacggtgatcaaccaaggcatctgggacatctgtcagagcagcagcacaaccact
aatgtaatctgcaacctgcgaggcaacgatccagtatattttaagaaccagatcattccc
atcgcacagggcatgatgatcgcgtcgttgatcgtgactgcaatcggactggttgtgctc
acgcctgctgtgcgctgctggaccgacagacctccgcgatggaccatcgctggaatcggc
ggcctgctcattttctgctcaggggtgctcactatcatccctatcgcgtggtatacgcat
atcctgaccagcctcaacacaactaccacgtttatcaacccgcaaagcccggacatccgc
gtgggctactgcatagttctgggttacatcggtgggatcatggaagtgcttggcggtttg
agcatatgcgtgggcttctgtcgatgctgcggaggacggaatcgcggagagaacccgcaa
ccagtgcgcgcgccccggaccaccactcgtgcgcctaatccgatcccatatccgcgcacc
aacttgccgaggagcgtcacgcccagcagctcgagcgtgccgtattcccgagactctctg
gacgaagacctagattacccgagagccaaaaatcagaagagaggcacggttaatccttcc
tacaacggaagaccgtacgacgcggatttgtga
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