Ictalurus punctatus (channel catfish): 108277159 Help Entry 108277159         CDS       T04658                                  Name (RefSeq) roundabout homolog 1 isoform X1   KO K06753   roundabout, axon guidance receptor 1 Organism ipu  Ictalurus punctatus (channel catfish) Brite KEGG Orthology (KO) [BR:ipu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:ipu04515]     108277159 Cell adhesion molecules [BR:ipu04515]  Immunoglobulin superfamily   ROBO family    108277159 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  I-set Ig_3 ig Ig_2 fn3 V-set C2-set_2 Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Roughex Motif Other DBs NCBI-GeneID:  108277159 NCBI-ProteinID:  XP_047016756 Ensembl:  ENSIPUG00000002272 UniProt:  A0A979F969 LinkDB All DBs Position 16:17790074..17983329 Genome browser AA seq 1657 aa AA seqDB search MPVAMPGAVLLIIAALLGSAGSEKPEDSKTDISAQNGLHEPTTSAPPSDHDEDNSPGYTG SRLRQEDYPPRIVEHPSDLIVSKGEPATLNCKAEGRPAPTVEWYKDGERVETDRDNPRSH RMLLPSGSLFFLRIVHGRRSKPDDGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNPAD VMVAEGEPAVLECQPPRGHPEPTISWRKDGANINDRDERITIRGGKLMITNARKSDAGKY ICVGTNMVGERESEIAELTVLERPSFTRRPTSVVVLADESVEFRCEARGDPFPTVRWRKE DGELPKGRYEILEDHTLSLRRVTPADVGSYSCLAENMVGKAEASATLTVHVPPTFVIRPR NQVVGVGRTVTFQCEAMGNPQPAIFWQREGSQNLLFSYQPPQPSSRFSVSQTGDLTITDV QRADGGHYSCQALNIAGSVITKALLEVTDVVSDRPPPVIRQGPENQTIVVDGTVLLNCIT TGSPVPTVLWKKDGVLVSTHDSRISQLDTGALQIRYAKLSDTGVYTCVSTSPSGEASWKA YLAVEEFGMAVQPIRPTDPNLIPSAPSKPEVTDVTRTSVTLTWKANTNGATPTSYVIEAF SHSSGSSWVTLADHVKTESFMLKGLKPSAVYLFLVRAANAYGLSDPSPITDAIRTQDTPP TIQGVDHRQIQKELGDVVVHLLNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRPSSESGE PRSQWGVFEVRTPGEDGAVVPQLKKGVTYEFKVRPFFDEFQGADSEVKVVRTLEEAPSGA PRGVTITKSDTNGTAILVAWQPPPEEEQNGVVQEYKIWCLGNESRYHVNRTVDGSTFSVV IPSLSPGIRYSVEVAASNGAGPGVKSDVTFFQLDSSGQVWDSFDDQDTFSNISDVVKQPA FIAGIGATCWVVLMVFSVWLYRHRKKRSGLSSSYAGIRKVPSFTFTPTVAYQRGGEAVCS AGRPGLLNMGDSANQPWLADSWPNACANHKDCSINCCNGGNGTSDSNLTTYSRPADCIAN YNSQLDNKQGVLIGSDSAVYSDVDLSNKLNEMKTFNNPSMCYMGPGGSPPTPYEPTPYAT TQLIQSNIMSKNSGAGPGDKRWKPQQPKPPELPSQLQFNVMEQNRLNKDHYRGGEVCLPA TIPYNQANEHSSAGSYHSSDRASNSTSGSQNHKKGTRTPKLSKQGGVNWAEPLPPPPINP PTSRSSEDYLQPMDKSFDPDPQKLQSRMYLHQGETEEEEEQENLVRCPTPPVRGAASSPV GISYSHQSTVTLTPSPQGELHNNQEDRRRHITSPPPPNQALSPSHTYAYTDGDDDECDYT DGESGQRQYQQNPGSHYQPQQQIQQQQVHLPRRLHLHRGLEQTPASSTGDLESSVTGSMI NGWGSASEEDNGSSGRSSAISSSDGSFFTDADFAQAVATAAEYAGLRVAHYPGAGPEDIG RGGQRYHIGHRPSSPVSTDSNMSTAVMQRKPHKRHKQHVAGHQSQQQQPQQQQHQQQPDE FTDDPSMPLSPSSVGMKTTNHGSRCGYEERGATLPRMGCGESRDRRGSAGGYRTREASAE RRGEHDKHRNTPGGKGAGKTRQHAVAEDIPPYNRPSFPTAQGQRDAPSSSSSISSRGSGG RRRGEVGSGGRKNPSDTGLPSLGVLSHQEEELELLES NT seq 4974 nt NT seq  +upstreamnt  +downstreamnt atgccagtcgcaatgccaggtgctgttctcctcatcattgctgctttactgggatcggct ggctctgagaaaccagaagactccaaaacagatatcagtgcacagaatgggctacatgaa ccaaccacatctgctccaccttctgaccatgatgaggacaactcacctggttacactggt tctcgtctccgtcaggaggactaccccccgcggattgtggagcacccatcagacctgatc gtgtcgaagggtgagccggccacgctgaactgtaaggccgagggccgtccagcacccact gtcgagtggtataaagatggtgagcgtgtggagacagacagggacaacccacgttcgcac cgtatgctccttcccagcggctcactcttcttcctgcgcatcgtgcacggtcgccgcagc aaacctgacgacggcagctacgtgtgtgtggccaggaactatctgggggaggcggtcagc cacaacgcttcactggaagtagccatcctgcgtgatgatttcagacagaaccctgctgat gtgatggtggccgagggggaaccggctgtgttggaatgccagccccctcgtggccaccca gagcccaccatctcctggaggaaggatggagccaacataaacgaccgagacgagcgcata acgatccgaggtggaaagctgatgattactaatgcaaggaagagtgatgctgggaaatac atctgtgtgggaaccaacatggtgggagagcgggagagtgagattgctgaactgactgtt ttagagagacccagcttcacgaggaggcccaccagtgtggtggtgctggctgatgagagt gtggagtttcgctgtgaggcccgtggagatccttttcccaccgtccgctggaggaaagag gacggagaattacccaaggggaggtacgagatccttgaagaccacacactgagcttgcga cgcgtaactccggctgacgtgggctcctacagctgcctagctgaaaacatggtgggcaag gctgaggcttccgctacgctgactgtgcatgtgccccctacgtttgtcattcggccccgc aaccaagtggtgggcgtgggccgaacggtcacgtttcagtgtgaggcgatgggaaaccca cagccggccatattttggcagagagagggtagccagaaccttctgttctcctaccagccc ccgcagccctccagccgtttttctgtctctcagactggcgatctcaccatcacagacgta cagcgtgctgatggaggacactacagctgtcaggcactcaacatcgccggcagcgtcatc accaaggccctgctggaggttacagacgtggtttcggatcggccgcctccagtgattcga caaggtccagagaaccagactatagttgtagatgggacggtgttgctgaactgcataaca accggatctcctgtaccaacggtgctctggaagaaagacggggtgcttgtgtccacccac gactcgcgcatctcccagctggacaccggagctctgcagatccgctatgccaagctcagt gatacaggagtgtacacttgcgtgtccaccagtcccagcggggaggcgtcatggaaagca tacctggctgtagaagagtttggaatggcggtccagcctatcagacccacagacccaaac ctgatccctagtgcaccctccaagcccgaggtgaccgatgttactcgcacctctgtcaca ttgacatggaaggccaatacaaacggagccacacccacatcttacgtcattgaggccttt agccattcatctgggagtagttgggtgactcttgctgaccatgtgaagacggaatcgttc atgctgaagggtctaaagcctagtgcagtgtatcttttcctggtaagagcagccaatgct tacggcctgagcgaccccagtcctataacagatgccatacggacacaagacacgcctccc accatacagggagtggaccaccgtcagatccagaaggaactgggggatgttgtggttcac ctgctcaatcccactatcctctcatcctcctcagtcagagtgcagtggacggtggagcag cagtctcaatacattcagggctacaaggtcatgtatcggccatcatcggagtccggtgag ccccgcagtcagtggggagtgtttgaagtgcgcactcctggcgaggacggtgctgttgta cctcaactcaaaaagggtgtcacttatgagtttaaagtgcgtccattctttgacgagttc cagggagctgacagtgaggtgaaggtggtcagaacgttggaggaggctcctagtggcgcc ccacgtggagttaccatcaccaagagcgacaccaacgggacagccatcctggtcgcctgg caacctcctccagaggaggagcagaacggagtggtccaggagtacaagatttggtgcctg ggaaatgagagtcgataccatgtcaaccgtaccgtggacggctccactttttccgtcgtc atccccagtctgtcgcctggcattcgctacagcgtggaggttgctgccagcaatggagct ggaccaggggtcaagagtgacgtcaccttctttcagctggactcgtctggccaggtgtgg gacagtttcgatgaccaggacactttttccaacatctctgatgtggtgaagcagcctgct ttcatcgcaggcatcggcgccacctgctgggtggtgctcatggtcttcagcgtgtggctg tatagacaccggaagaagaggagcggcctcagcagcagctatgccggcattcgtaaagtt ccatcattcactttcactccaacagtggcatatcagagaggaggagaagctgtttgcagt gccggacgacctggcctattaaacatgggagattcagccaaccagccatggctagctgac tcatggcccaacgcctgtgccaaccacaaagactgcagcatcaactgctgtaatggtggc aatggaaccagcgacagcaacctgaccacctacagccgtccagctgattgcattgctaac tacaacagccaactggacaataagcaaggagtgctgataggctccgactcagctgtgtac agtgatgtagacctttctaacaaacttaatgagatgaagaccttcaacaaccccagcatg tgctacatgggacccggaggcagcccgcctacaccatatgagcccacaccttatgcaacc acccagctcatccaatcaaacatcatgagcaagaacagtggtgcagggcctggtgacaag cgctggaagccccagcaaccaaaacccccggaactaccatcacagttacagtttaatgtt atggagcaaaataggctgaacaaggatcattacagaggtggtgaagtttgtctgcctgcc accattccctataaccaggcaaatgagcacagctctgcagggtcctaccacagctccgac agagccagcaacagcacttcggggagtcaaaatcataaaaaaggaactcgcacccctaaa ctgtctaaacagggtggagtgaactgggcggagccgctgcccccacctcctatcaacccc cctaccagccgcagctctgaagactacctacagcccatggataaaagttttgatccagac ccacagaagcttcagagccgcatgtacctgcaccaaggggagacagaagaagaggaagag caggagaatttggttaggtgccccactccacctgttagaggggcagcctcctcacctgta ggaatatcctacagccaccagtccacagtcacacttactccctcccctcagggagagcta cacaacaaccaggaagatcgcagacgacacataacaagcccccctccaccaaaccaggcc ctctcgccctcgcacacctacgcctatactgatggcgatgatgacgagtgtgattacaca gatggtgagtcaggccagaggcagtaccagcaaaacccaggatcccactaccagcctcag cagcagatccagcagcagcaggtccatctcccacgccggctgcatctgcacaggggcctg gagcagactccagcctcgagcacgggggacctggagagctccgtcactgggtcaatgatc aacggctggggctcggcatctgaagaggacaacggctcatcgggccgctccagtgccatc agctcctccgatggctcttttttcactgatgctgattttgcccaggctgttgccacggca gctgagtatgctggcctacgagtggcccattatccaggggcagggcctgaagacattgga agaggtggtcaaagataccacattggccaccgtcccagtagcccagtgtccacagacagc aacatgagcactgcagtgatgcagaggaaaccacacaaaaggcacaagcagcatgtggct ggtcaccagagccaacagcagcagccgcagcagcagcaacatcaacaacaaccagatgaa tttacagatgacccatcaatgcccctgagcccctcctcagttggaatgaagaccaccaat catggttccaggtgtggatatgaggagaggggtgcaacgctgcccaggatgggatgtgga gagtccagagacaggcggggaagtgcagggggctaccggacaagagaggcctcagctgag cgacgaggggagcacgataaacaccggaacacacctggaggaaaaggtgctggcaaaaca cgccaacatgcagttgcagaggacattccaccgtacaacaggccatcgttccccacagca cagggtcagagagatgctcccagctcctccagttcgatttcgtcccggggctctgggggc cgccggcgaggggaggtaggatcaggaggccgtaaaaaccccagtgatacaggactccca agtttgggggtcttatcccaccaggaagaagagttagagctgctggagagttga

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