Ictalurus punctatus (channel catfish): 108277187
Help
Entry
108277187 CDS
T04658
Name
(RefSeq) heat shock cognate 71 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03040
Spliceosome
ipu04010
MAPK signaling pathway
ipu04141
Protein processing in endoplasmic reticulum
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108277187
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108277187
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108277187
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108277187
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108277187
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108277187
03009 Ribosome biogenesis [BR:
ipu03009
]
108277187
03110 Chaperones and folding catalysts [BR:
ipu03110
]
108277187
04131 Membrane trafficking [BR:
ipu04131
]
108277187
03051 Proteasome [BR:
ipu03051
]
108277187
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108277187
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108277187
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108277187
Spliceosome [BR:
ipu03041
]
Complex B
Other components
Prp19 complex
108277187
Complex C
Prp19-CDC5 complex
108277187
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108277187
Chaperones and folding catalysts [BR:
ipu03110
]
Heat shock proteins
HSP70 / DNAK
108277187
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108277187
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108277187
Proteasome [BR:
ipu03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108277187
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108277187
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108277187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
Ppx-GppA
Hydantoinase_A
PIN-TPR-GreABC
Motif
Other DBs
NCBI-GeneID:
108277187
NCBI-ProteinID:
XP_017345173
Ensembl:
ENSIPUG00000006340
UniProt:
A0A2D0SR52
LinkDB
All DBs
Position
16:15011955..15016854
Genome browser
AA seq
646 aa
AA seq
DB search
MSKGTAVGIDLGTTYSCVGIFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
MNPTNTIFDAKRLIGRRFEDAVVQADMKHWPFKVISDGGRPKVEVEYKGETKNFYPEEIS
SMVLVKMKEIAEAYLGKSINNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA
IAYGLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
FIAEFKRKYKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRA
RFEELNADLFRGTLDPVEKSLRDAKLDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN
KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTI
PTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI
DANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKN
GLESYAFNMKSTVEDEKLQGKISEEDKQKILDKCNEIISWLDKNQTAEKEEYEHQQQELE
KVCNPIITKLYQSAGGMPGGMPGGFPGAGGAPSGGGSSGPTIEEVD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagggaactgcagttggcattgatctagggaccacttactcctgtgtgggaatc
ttccagcatggcaaagtggaaatcattgctaatgaccaaggaaacaggaccacaccaagc
tatgtggccttcacggatactgaaaggttgattggtgacgcagccaagaaccaagtggcc
atgaaccccacgaacacaatctttgatgccaagcgtttgattggcaggaggtttgaagac
gccgtggttcaggctgacatgaaacattggcctttcaaggtcatcagtgatggtggacgt
cccaaagtggaggttgaatataaaggagagactaagaacttctaccctgaggaaatctcc
tccatggtgttggtgaagatgaaggaaattgctgaagcctaccttggaaagtctatcaat
aatgctgtgataacagtaccagcttacttcaacgactctcagcgtcaagccacaaaagat
gctggaactatctctggtctaaatgttctacgaattattaatgagcctactgctgctgct
attgcctatgggctggacaagaaggttggttctgaaaggaacgtcctcatctttgatctc
ggtggtggcaccttcgatgtgtccatcctgactattgaagatggcatctttgaggtcaaa
tccactgctggtgacactcatctgggtggtgaagacttcgacaaccgcatggtgaaccac
ttcattgctgagttcaaacgcaagtacaagaaggacatcagtgacaacaagagagctgtt
cgccgtctgcgcactgcctgtgagcgggccaagcgcaccctgtcctccagcactcaggcc
agcattgagatcgactctctttatgagggtgttgatttctacacgtccatcacaagagct
cgctttgaggagctcaacgctgacctcttccgtggaaccctggaccctgttgaaaaatct
ctccgtgatgccaaattagacaaagctcagatccacgacatagtcctggttggtggctct
acccgcattcccaagattcagaagctccttcaagatttcttcaatggcaaggagctcaat
aagagcatcaaccctgatgaggctgtggcttacggagcagctgtccaggctgccatcctc
tctggggacaagtctgagaacgttcaggacctgctgctgcttgatgtcacccctctgtct
cttggaattgagactgctggtggggtgatgactgctctgatcaagcgcaacaccaccatt
ccaaccaagcagacccagactttcaccacctactcagacaaccagcctggtgtgctgatt
caggtttacgagggtgagcgtgccatgaccaaggacaacaacctgctgggtaaatttgag
cttactggaatcccacctgctcctcgtggtgttccccagattgaggtcacatttgacatt
gatgccaatggcatccttaatgtctctgctgttgacaagagcactggcaaagagaacaag
atcacaatcacgaacgacaagggccgtctcagcaaggaggacattgagcgcatggtgcag
gaggctgagaaatacaaggcggaggatgatgtgcagcgtgataaggtgtctgccaagaat
ggcctggagtcctatgctttcaatatgaagtccactgtagaggatgagaagctgcagggc
aagatcagtgaagaggacaagcagaagatcctggacaaatgcaatgagatcattagctgg
cttgataagaatcagactgcagaaaaagaagaatatgagcatcagcagcaggaactggag
aaagtctgtaacccaatcatcaccaaactgtaccaaagtgctggaggcatgccaggtgga
atgccaggtggcttccctggagctggtggtgctccctctggtggtggatcctctggacca
accattgaagaagttgattaa
DBGET
integrated database retrieval system