Ictalurus punctatus (channel catfish): 108277200
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Entry
108277200 CDS
T04658
Name
(RefSeq) tyrosine-protein kinase SYK isoform X1
KO
K05855
spleen tyrosine kinase [EC:
2.7.10.2
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04625
C-type lectin receptor signaling pathway
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
108277200
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108277200
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ipu01001
]
108277200
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
108277200
Protein kinases [BR:
ipu01001
]
Non-receptor tyrosine kinases
SYK family
108277200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
SH2
DUF7145
DUF7063
ABC1
Kdo
SH2_1
Haspin_kinase
RIO1
Motif
Other DBs
NCBI-GeneID:
108277200
NCBI-ProteinID:
XP_017345199
Ensembl:
ENSIPUG00000024970
UniProt:
A0A2D0SR82
LinkDB
All DBs
Position
16:19273193..19296385
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AA seq
627 aa
AA seq
DB search
MADEVQGLSFFYGNITREEAEDYLRQAGMSNGLYLLRQSRNYLCGFALSVAYNHQCYHYT
IERELNETYAIAGGKSHRSPVGLVEYHAQESDGLVCLLKKPCNRPRGVEPKVGAFEDLKE
QLIRQYVQQTWKLKGASLEQAIISQRPQLEKLIATTAHEKMPWFHGTISREDCEPRLLNN
PRTNGKFLIRQRDNNGSYALCLLHHGQVMHYRIDRDKAGKLSIPDGKKFDTLWQLVEHYS
YKPDGLLRVLTEPCPRPEGPPALPGNHPDLGGPSGILSRIRSASFPKPGLKKTALKKCKE
KILDVCPGKITTYLRRNHETDNHYAQRETMLATEDLPMSTEVYESPYADPDELRSTTVDR
KNLLLEDGELGSGNFGTVLRGTYQMRKTQKPVAIKILKNGENNAAVKDEMLREAQVMQQL
DNPYIVRMIGICEAENLMLVMELAELGPLNKYLQKNRLAVKNVTELVHQVCMGMKYLEEH
NFVHRDLAARNVLLVTQHYAKISDFGLSKALTSEHDYYESKGHGKWPVKWYAPECMNYFK
FSCKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVIQMIESGERMAAPPSCPTEMYNLMMKC
WTYKPDERPSFAVVEPRLRDYYYDISQ
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaggtgcaaggcttgtcctttttctatggcaacatcactcgagaggaagct
gaggattatctgaggcaagcaggcatgagcaacggcctctacctgctccgtcagagccgt
aactacctgtgtggattcgcactgtccgtggcctacaaccatcagtgctaccactacacc
attgagagggagttgaatgagacatatgccatagcaggtggaaaatcccaccgcagtcca
gtgggtttagtggagtaccatgcgcaggaatctgatggcctggtgtgtctgctgaaaaag
ccctgcaatcggccccggggtgtcgagcccaaggtgggggctttcgaggatctgaaagag
cagctcatcaggcaatatgtacagcagacatggaagctgaagggtgcctcattggagcag
gctatcatcagtcagaggcctcagctggagaagctgattgccaccacggcacatgagaag
atgccctggtttcatgggaccatctctcgggaagactgtgagccacgtttactcaacaac
ccccgcaccaatggcaagtttctaatccggcagcgagataacaatggctcctatgcactc
tgtctcctccatcatggccaagtcatgcactatcgcatcgacagggacaaagctggcaaa
ctctccattcctgatggaaaaaagtttgacacactttggcagctggtggagcattattcc
tacaaacctgatggcctgctccgggtgctgactgaaccctgcccacgacctgaaggccca
cctgcacttcctggaaatcatccagatctgggtggcccaagtggaattctctccagaatc
agatccgcttccttccccaaacctggtctcaaaaagacagcgttaaagaagtgtaaagaa
aagatcttagatgtttgccctggtaagatcacaacatatcttcgcagaaatcacgagact
gataatcattatgctcagagggaaacaatgcttgccacagaggacttacccatgagcact
gaggtgtatgagagtccatatgctgaccctgatgaactacgctcaaccacagtggaccgg
aaaaacttgcttctggaggatggagagcttggctcaggcaattttggcacggttctaagg
ggaacctaccagatgaggaaaacacagaaaccggtagcaataaagatcctgaagaacgga
gaaaacaatgctgcagtaaaggacgaaatgctccgtgaggctcaagtcatgcagcagctg
gacaacccctacatagtgcgtatgatcggcatctgtgaggccgagaacctcatgttagtc
atggagctggctgaactcggccctctgaacaagtatctgcaaaaaaacagacttgccgtt
aaaaacgtcactgagcttgtgcatcaggtctgtatggggatgaagtacctggaggagcat
aacttcgttcacagagacctggcagcccgcaatgtgctgttagtcacccagcactatgca
aaaatcagtgactttggcctgtccaaagccctcaccagtgagcatgattattatgagtct
aaaggtcatggtaagtggcctgtgaagtggtatgcgcccgaatgcatgaactacttcaag
ttctcctgtaagagtgacgtgtggagcttcggggtgctgatgtgggaggctttttcatac
ggacagaagccatataaggggatgaagggaaatgaggttatccagatgattgagagtggt
gagaggatggctgctccacccagctgcccaactgagatgtacaacctcatgatgaaatgc
tggacatataagccggatgagaggccaagctttgctgtggtggagcccaggctaagagac
tactactatgacatttctcagtga
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