Ictalurus punctatus (channel catfish): 108277234
Help
Entry
108277234 CDS
T04658
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1 isoform X3
KO
K11657
remodeling and spacing factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108277234 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108277234 (rsf1b.1)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
108277234 (rsf1b.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
108277234
NCBI-ProteinID:
XP_017345267
Ensembl:
ENSIPUG00000003955
UniProt:
A0A2D0SRD4
LinkDB
All DBs
Position
16:complement(1618601..1629771)
Genome browser
AA seq
1644 aa
AA seq
DB search
MAASAAAAGSSPGLCPSFAVICSFLERYGVLLDLPELSFPQLERYLQETSTVPKLLVDLH
VKLLRKIGKSVSADRWEKYLVKMCQEFNTTWAWELEKKGYCEMTVECKTGILKYLCECQF
DDNVKFKTAINEEDPDKMRLQPIGRDKDGLMYWFQLDQDHNVRVYVEEQDDLDGSSWKCI
VRNRNDLAQILALLKTQIDPTLLVKKDQEEGSSSNSPNSETEENKKKEDDVDVKKDKDLE
EEKSPKTEKDDPLEQIDSVKQEIAVGKEALRDKAAKDDVRSEKPVVGEETASRAVKEEPM
EEDEAFNNTSKSTSEKNGGPLPSEHTREVKKSSDEIQKALKNDQQAKIPLKKREMKRSED
FDTANCGSGGSSIIVRNPAVKDVRTASEENGLRTGENLNGNVSPAVAVEGDGKASDDLQI
KQKEPPAISEDQQADAEVKETKKQLSDAKQEEGHEEKQKKEEETTDKSQTSTEESMEVEE
SAVAKGDQETSPQVEEAAQTTETSSGSEVIRLQADSEKDDESAETEVAKDCSKPLDEEAP
KKSSETKPTDQAETESKPKTSKETPNERDTDQERELIKHESGQTDKKNDTASNENADAAK
DDKTQTGTEAPMETERSTSEDSAQQQSTAQEQSELAVQKADEPGMSEETKSPVDETTSTT
LKDSALLEGDEKPESGSTKQTEKQERPKEENIPVKENVESEPLNKGKEPPEDSDVSNTKE
KPSSPKENERTEGCEKSAVCEETDTEPAAKESLKSDRDRTPDKTTPDAEGPHSVATQKES
ADQEKQDVLKKSEEPPTRAVSKTEEVVKQDKPMEVTSAHTEDNKVPTDNKDCDAEPKKEA
CSKKGVQDEHPVEESKASTEESSENRKENGEQKSTSEKEANLSGESTEDQNRAEEKTKTG
KGEADDRKELPQEAIRLKIKVPAHRRRAELQREEGKGDSESEASEGRCLRRSPRICRPTA
KLAEIQDRKVEKKQVTPSVEKEKEENEEKDGDENAVQKKPREKKVDQEGQAKPKGRRQRR
VRWSRVRSQRKKKGSEEDDDNENDESSSEEEETEEDDSDEDYQVEKKKRRRNRNRERNSS
DSSTSSSDDLPPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPP
CQHKLLCDKLEEQLQNLDVALKKKERAERRKERLVYVGISVENIITPTQLEAEEEKQEEV
VKEKKEVKKNKSWGRRSTRAKKYISYRFDEFDEAIEEAIEEDIKEAEGGGAGRGKDMANI
TGHRGKDMSAILQEEGKENGRPKRTNAGQRRKKRRRLNDLDSDSTMDEEESEEEFRLSDS
SEEEEFVASDNDVDSEGEAPLFDDSDFGSDGQGPTTGFLSRRRSTKRWSARPRRRRRPKG
YSDDEELEDTDEDEEEEEMVTEGSSEFSDSDLDMRRRRSHRSQKKQVNYCEATDSDASQG
STNRDKAKKRRRLSSSESDASFHSMDSDKEDGKSKKQRAVLSEEESRKRRRRLSLKRRRE
SEDDDNSSDSDDSEEEERPVRKRVNRIDSDDSDEEEEEKKSTEKEAEDTVAKGVSPLDYN
LELPPTNGQSPMKTLEGFISRPATGMANPALMSQIGLKNSSAPQPVSIGANGLVPQEMAP
QDEDEDDLLGVTDLVDYVCNSEQL
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggcggcagcggcggggtcttctcccgggttgtgcccaagcttcgccgta
atctgctcttttttagagcgttatggagtcctattggatctgcccgagctctcgttcccg
cagctggagcgctatctgcaggaaacgtccacagttcctaagctgctggtggacctccac
gtgaagttacttcggaaaataggcaagtccgtttctgccgaccgatgggagaaatatctt
gtaaagatgtgccaggagttcaacaccacctgggcatgggaactggagaagaagggatat
tgtgagatgactgtggagtgtaagactggaattctcaagtacttgtgcgagtgccagttc
gacgacaacgtcaagttcaagacggccatcaacgaagaagaccctgataaaatgcgcctc
cagcccatcggcagagacaaagacggcctcatgtactggttccagcttgaccaggatcac
aacgtgagggtgtacgtggaggagcaggatgatttagatggctcatcctggaaatgcatc
gttagaaacagaaacgatttggcccagatcctcgcactcctgaagactcagatcgatccc
acactgttggtcaaaaaggatcaggaggaaggttcgtctagtaacagcccaaactcggag
actgaagaaaacaagaagaaagaggatgatgtggacgttaagaaagacaaggatctggag
gaagagaagtctcccaaaactgaaaaagatgacccgttagagcaaatcgatagcgtaaag
caggaaatcgcagtgggaaaagaagcactgagggacaaggccgctaaagacgacgtccgg
tctgaaaagccggtcgtaggagaggaaaccgctagcagagcggttaaagaggagcccatg
gaagaagacgaagcgttcaacaacacctccaagtcaacatctgaaaagaacggtggaccg
ctgccttcagaacatacgagggaggtgaagaagtcgtcagacgagatccagaaagctttg
aaaaacgaccaacaggcaaagatccccctgaagaagcgtgagatgaagcgaagtgaggat
tttgacaccgccaattgtggaagcggcggcagcagcatcatcgtgcgtaacccagctgta
aaagacgtgcggaccgccagcgaagagaacgggttgagaacgggcgagaacctcaacggt
aacgtctcgcctgctgtagcggtggagggtgacgggaaggcgagtgacgacttgcagata
aagcaaaaagaaccgccagctatttctgaagatcagcaagcagacgctgaagtcaaggaa
acaaaaaaacagctttctgacgcaaaacaagaagagggacatgaagaaaagcagaagaaa
gaggaggaaacgacggataagagccaaactagcacagaggagtccatggaagtggaggaa
agtgcggttgcaaagggggatcaagaaacatcgccacaggtagaagaggcagctcagaca
accgaaacgtcatccggatccgaagtgatccgcttgcaagcggattcggaaaaggacgac
gagtcggccgagacggaagtcgcgaaagattgttcaaaacctctcgacgaggaagcgccc
aagaagtcaagtgagacgaaacccacggaccaagctgagaccgagagcaagccaaagacc
tcaaaagagactcctaatgagagagatacagatcaggagcgagaactaataaaacatgag
tccggccagactgataaaaagaacgatacagcctcgaatgagaacgcagatgctgcaaaa
gacgacaaaacacagacgggaaccgaggcccccatggagactgagcggtctacatcagaa
gactctgcacaacagcaaagtacagctcaggaacagagcgaactagctgtccaaaaagca
gacgagcctggcatgtccgaagaaaccaaaagtcctgttgatgaaacaacatctacaact
ctaaaggacagtgccttactggaaggtgatgaaaaacctgaatcgggttctacaaagcag
accgagaaacaggagcgtcctaaagaggagaacatcccagttaaggaaaacgtagaatct
gaacctttaaataaaggaaaggaaccgcctgaagattccgatgtatccaacacgaaggaa
aaaccatcctcgccaaaagaaaacgaacggactgaaggctgtgaaaaatccgccgtgtgt
gaagagacggatacggaacctgcagccaaagagtctttaaaatcggatcgtgacaggacg
ccggataaaaccacgccagacgcagaaggaccccattcagttgctacccaaaaagaatcg
gcagatcaggagaaacaggatgtcctgaaaaagtcagaggaacctcctactcgtgcagta
tccaaaacagaggaagtagtgaagcaggataagccaatggaagtaacttcagcgcacaca
gaggataataaagtacccacagataataaggattgtgatgctgagcctaaaaaggaagct
tgcagtaagaaaggcgtgcaggacgagcatcctgtcgaggagagcaaggcttctacagaa
gagtccagcgagaaccggaaagaaaacggtgaacaaaaaagtacttccgagaaggaggcg
aacctcagcggtgaatcgacggaagaccagaatcgagcagaggagaagacgaagacgggt
aaaggagaagcagacgatcgcaaagaactaccacaagaagcgatccgtctgaaaatcaag
gtcccggctcacaggaggcgggcagagctgcagcgagaagagggaaagggtgactcggag
tctgaggcgagcgaagggagatgtctgaggcgctcgccgaggatttgcagaccaacagcc
aagctagcagaaatccaagaccggaaggtggagaagaaacaagtcacgccttcggtcgag
aaggagaaggaggaaaatgaagaaaaggatggggatgaaaatgcagtacaaaaaaagcca
agagagaagaaggttgatcaagaaggtcaagctaaaccaaaggggagacgccaaaggcgg
gtacgatggtccagagtccggtcacagcgcaaaaagaaaggctcggaggaagacgacgac
aacgagaatgacgagagttcaagcgaggaggaggagaccgaggaagacgacagtgatgag
gattaccaggtggagaaaaaaaagagaaggcggaaccgcaacagagagaggaacagctct
gattcttctacctcgtcttcagacgaccttccgccaaacgatgacccctgcaaacactgt
ggcctgcccaaccatcctgagctgattctgctgtgcgactcgtgcgacagcggttatcac
acagcgtgtctccgtcctcctctcatgatcatcccggatggtgaatggttctgtccacca
tgccaacataaactgctttgtgacaagctggaagaacagttacagaatctagacgtggca
ctcaagaagaaggaacgtgccgagcgaaggaaagagcgtctggtctacgtcgggatcagc
gtcgagaatataatcacgcctacccagcttgaagcagaggaagaaaaacaagaagaggtg
gtgaaagagaagaaggaggtcaagaaaaacaagtcctggggccgaagatcgacccgggcc
aaaaaatacataagctacaggtttgacgagtttgacgaagctatcgaggaggcgatcgaa
gaagatatcaaagaggctgagggaggaggagcaggccgtggtaaggacatggcaaatatc
acaggccaccgagggaaggacatgtccgccattttgcaggaagaagggaaagaaaatggg
cggcccaagcgtacaaatgctggacagcggcggaaaaaacggcggcgcctcaacgacctg
gacagcgacagcaccatggacgaagaggagagcgaggaagagttccgcctgagcgacagc
agtgaggaggaggagtttgtggcgtcggataacgatgtggacagtgagggagaggcaccg
ttatttgacgacagcgacttcggcagcgacggccagggaccaactacgggctttttgtcc
aggcggaggtcgactaaacggtggagcgcgcgaccacgcaggcgacgcagacccaaagga
tactccgatgacgaagagctcgaggacaccgatgaagacgaggaggaagaagaaatggtg
actgagggttccagtgagtttagtgacagtgacctggacatgcgcaggcggcgttcccac
cggagccagaaaaagcaagtcaactactgcgaggcgaccgactcggacgcctcccaggga
agcaccaacagggacaaggccaagaagcgcaggcgcttatccagctccgaaagcgacgcg
agcttccattccatggactcggacaaggaagatggaaagagtaaaaagcagagggcggtc
ctgtcggaagaggagtctcggaaacggcgcaggcgtctgtcactgaagcgcaggagggag
tccgaggacgacgacaatagcagcgattcggatgattcggaggaagaggaacggcccgtc
cgcaagcgggtgaaccgaatcgattcggacgacagcgacgaggaggaggaggagaagaag
agcacagagaaggaggccgaggacaccgtagcgaaaggggtcagccctctagactataac
ctggaacttcctcctactaacggacagagccccatgaaaactctggagggtttcatctcg
cggcctgccactggcatggctaaccctgctctcatgagtcaaatagggctgaaaaacagc
agcgcaccacaacccgtgtccattggcgccaacggcctggttccccaggagatggcgccg
caggatgaagacgaggatgaccttttgggggtcacagaccttgtagactatgtctgcaat
agtgaacagttgtaa
DBGET
integrated database retrieval system
