Ictalurus punctatus (channel catfish): 108277276
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Entry
108277276 CDS
T04658
Name
(RefSeq) poly(ADP-ribose) glycohydrolase isoform X1
KO
K07759
poly(ADP-ribose) glycohydrolase [EC:
3.2.1.143
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108277276
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.143 poly(ADP-ribose) glycohydrolase
108277276
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Paralog
GFIT
Motif
Pfam:
PARG_cat_C
PARG_cat_N
Ca_chan_IQ
Death_3
Motif
Other DBs
NCBI-GeneID:
108277276
NCBI-ProteinID:
XP_017345358
Ensembl:
ENSIPUG00000006939
UniProt:
A0A2D0SRN5
LinkDB
All DBs
Position
16:complement(21608..32990)
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AA seq
595 aa
AA seq
DB search
MKKFIMGFVAFCTNHGQARCHCKMANNNSSQVKECLTHFDMAGESKPGSSQDTTDGSSSK
RKYSESSSTEVTDPRQKPGTEAQAGDTQCEGKLNKEPECHMQLDKLSADRNHTVLIDINE
FNAGRIVPYKGKHHWDHLHVKLPQCYPLNTMGSRWAAIEKALKKLTDKGVSVGDVERAIK
TYNHSHRRDWNFDALSSYVAQVPKLENNFPNVISKMAKLALKLPELIQHPIPLLRQKCNH
AITMSQEQISCLLANAFFCTFPHRNATHPNSEYGNFPTINFSSLFAERSPRKFQKLRALF
HYFNTVTKEDSKPDGLVTFERISIKPSECPEWNKQKGNLTSLQVYSKGCIEKEGKGMLQV
DFAAKMVGGGVLGRGLVQEEIRFIQCPELIVARLFTEKLADNECLKITGVQMYSNTHGYS
DTFEWHSPHTDQTKRDEWKRLYCQIVAIDALRFDDPRQQFTEISIKRELLKAYVGFKRDN
VPTEYTSAIATGNWGCGAFKGDPMLKALIQMMAAAVAQRDLAYFTFDNEQQAEHLQRMHK
LLKSHNMTVGKLYNLLQDYCKHYSLHHHHHHHHPHQVKNVFDYIREKLAIRSSQL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttatcatgggatttgtagctttttgtaccaatcacggtcaagcaagatgt
cactgtaagatggctaataacaacagttctcaagtgaaggaatgcctcacacacttcgac
atggctggggaaagcaaaccaggatcgagccaagacacaacggatggctcttcatcgaaa
cgaaagtacagcgagtcctccagtactgaagtcactgacccaaggcaaaaaccaggcact
gaggcacaggccggagatacacagtgtgagggaaagctgaataaagaacctgagtgccac
atgcagctggacaaactgtctgcagacaggaatcacacagtgcttatagatataaacgaa
tttaatgctggcagaatagttccatataagggaaagcatcattgggaccacctccatgtg
aaattaccccaatgttatccactgaataccatggggtctcgctgggcagccatagagaaa
gctctgaaaaagcttacagataagggtgtttcagtaggagatgttgagagggccattaaa
acttacaatcactcccacaggagggactggaatttcgatgccctttcctcatatgttgcg
caagtgccaaagctggagaacaattttcccaatgtgatctcaaaaatggccaaacttgca
ctgaagttgcctgagctcatccaacatcccatccctttgctgaggcagaagtgcaaccat
gccataacgatgtcccaggagcagatctcctgcctgctggccaatgcgttcttctgcacc
tttccccacagaaatgcaactcatcccaacagtgaatacggcaatttccccaccatcaac
ttcagcagcctgttcgctgaaaggtctccacggaagtttcagaagctgagagcccttttt
cactacttcaacactgtaaccaaagaagactccaaacctgatggactggtcacttttgaa
agaattagcattaaaccatctgagtgccctgaatggaataagcagaagggaaatttgacc
agcctccaggtgtactcgaaaggctgcatcgagaaggaaggtaaaggcatgctgcaggtg
gattttgctgccaagatggtaggtggaggagtgctcgggcgaggactggtgcaggaagag
attcgcttcattcagtgccctgaactgattgtggccaggctcttcacagaaaaactggct
gacaatgaatgtctgaagatcacaggcgtccagatgtacagcaatacccatggctacagc
gatacctttgagtggcacagcccccatacagaccaaaccaaaagggatgaatggaaacgg
ctttactgtcagattgttgccattgacgctttgagatttgacgacccaagacagcagttc
actgagataagcatcaaacgagagctactcaaggcgtacgtcggcttcaagagggataac
gttcctactgaatacacttctgctattgctactggcaactggggatgtggagcttttaaa
ggtgatccaatgctcaaagctcttattcagatgatggctgcagctgtggctcagagagac
ttggcctacttcacctttgacaatgagcagcaggcagagcacctgcagagaatgcacaag
ttactgaagagtcacaacatgactgtgggcaagttatacaatctgctgcaggactactgt
aagcactacagtcttcatcatcatcatcatcatcatcatcctcatcaagtgaagaatgtg
tttgactacatcagggagaagctggctattcgctccagtcagctgtga
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