Ictalurus punctatus (channel catfish): 108277286 Help Entry 108277286         CDS       T04658                                  Symbol dchs1b Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism ipu  Ictalurus punctatus (channel catfish) Brite KEGG Orthology (KO) [BR:ipu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:ipu04515]     108277286 (dchs1b) Cell adhesion molecules [BR:ipu04515]  Cadherins   Cadherin related    108277286 (dchs1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_2 Fibulin_C Cadherin_4 Big_9 TMEM154 CADH_Y-type_LIR Glrx-like Motif Other DBs NCBI-GeneID:  108277286 NCBI-ProteinID:  XP_017345372 Ensembl:  ENSIPUG00000010844 UniProt:  W5UF55 LinkDB All DBs Position 16:10896441..11002990 Genome browser AA seq 3282 aa AA seqDB search MKLFRGSGDNSLRLRMFLLVFLTVELLTVMVNVDATASILELQLDEEQPAGTIVGDISAG LPPGEKASLYFISDHEGTSVGTDLHIDETTGIIKTARRLDREERDHYSFIAVTMTGLTVK VSITVNDINDHAPVFPKNKAYLKIPEQTAVGTRFSLEPATDADKDQLTTQGYLIKDGNVG QVFRLETKRAANKVLYLDLVVNGVLDREKRASYSLVLEAFDGGSPKKTGQLTLDVTVQDI NDHAPVFNQSRYHAIISESLPQGSNILQVFASDADEGDNGLVLYEINRRQSDPDRYFVID PRSGIITLNKPLDYEVRKVHELVVQAKDNASHPEITNAFVTIHVRDYNDNQPTMTIIFLS EDGSPRISEGAQPGQYVARISVSDPDYGEYSNVNVSLEGGDGKFALTTKDSIIYLICVDQ VLDREERDSYELRVMATDSGTPPLRAESSFTIQVTDINDNPPLFDQQAYKQTIPEVVYPG SFVLQVTARDKDQGPNGDVRYSILPNNGTHSNWFTIDAVTGIITTATELDYETDPKASVK IVATDGGKPPLSSTAMVEISLQDINDNKPVFGSSFYNASIKENTAAGTCFLEVTAIDADG GSFGAITYSIGSGPSSSPPGVFSINKETGHICTSAALDRDEGSESYEFTVTALDGGGLSS SAYVNVALLDINDNRPMFYPVNYAVSLSSQSAPGTSVIRVSAHDPDAGENGKVTYRTVSG GGSNFFTLNKDTGVISLSRSLHGKANSVITMVITALDGGGLTVPVNARVNISVVAGSVAP PVFEQAQYFFTVPEDVLRGTEVGVVFANSRNGGNKDISYTISSGDPEGYFTVDIETGALR TSLPLDHEAWPSLELEVQARSGSPPVFAQTLVRITITDVNDNAPTFLPSSSESLLLPEAT KMGTIVYRVKAEDRDSGANGQLSFDLLSSEGQRTFSVDRSSGEIRLIGSLSYESAPRYDL LVLAKDCGAPQLSATFTLVVHIQAENDQGPVFDTMTYRVELKENTPLNTRFLQVRALSRD HGGNGASSSSSTPLSYHLRPDGDAAGFGIISDSGWLFVKSALDREGKNIYMLTVLASSGR GQLKKTGSATVRVSVTDENDNSPRFSQERVFLAVRENLPAGTGFGRVSATDRDAGLNSRL TFKLLHTDRNFQINSQTGEISTRAALDREHQSSYQLVVVVQDGGTPPRSATGTAHVTVLD ENDNTPLLSHVLPGRELIIQVQEGLPAGSLLGTLQAKDPDEGENGTIFYSLSGSRAERFS LNPNTGELRSASTLRRAEKAEYSLTVIVSDRGAPPQSVSSILHIQVAGSAKAPQKPNTLS MALNTMEGTKPGSVIGSVHLHDQRDMLPDGQVTFLVVGGTDQDGNFMVDRLTGDVYLVRE LDYEMGAHFTLQIEVDDFSKASPSSRVIVLDINVQDSNDHAPQFPEDPVTIVVPENMQPG SSIYAFQASDKDGSGPNSEVRYSIQHHWPDRSDLLFLDPITGVLSLGQVLDHEETSSLFL VVQATDSATDPSQRRWSSVTARIFVTDENDNAPVFSSPTAVSVMEDKPMGFVLLYIIARD ADQGENGRVSYRIQAGNTAGRFSLNPNTGSLSILKALDREEQDSYNLTIVAEDHGTPQHS TTQVLSVQVIDVNDEAPWFELSEYEVQIRENQPAGTTILTVSATDRDQGTNGHVSYGGVT VEGFVISPETGVISLTKVLDREQQDHYSVTVYAKDGGMPPNFAKAKVHITVLDENDNAPA FGRLQYSLELPENLTPVEIFLIKATDHDSGDSGRVEYRVIAGDPDGDFQLDSSSGALSTS RPLDRERKDRYSLEVVAQDHGIPSLTSTATVEVTVLDINDNSPTFSSSSYAVDISEDSAI GSLVLEVTANDADEGKNGQILYFLSKEARGTFTIDPDTGRILTASLLDREKMASYSFQVC AVDLSPAAPHNTTVQVTVTILDMNDNAPFFIQDPLIINVSSRRVSTNHVVATMRAEDKDF GANGSVFYRFAKPVQGFSINSLTGEIQTTEALNSLTQNQYILIVEAMDQGSPPQSSLGVV IIYVKEQNYDGIRFSRTARDVSIQENAAKGTAVAQAQAQYPDGTRIGITYSIFSGNKQQS FSISSSTGEIWVQSSNGLDFEDTPRLRLVVKAETATSSSFMAVNLILQDVNDNLPRFQLQ NYIAYMHEAQGYDSPIIQVVAEDVDQGPNGQVTYSIQSSGRSGLFKIDPLTGSVTTAAIM DREIWMQTKLVIMATDRGIPKLAGSATVTVIIVDLNDNSPTIPLPREVRVPENSVIGTEI TMVTGNDVDSGPALSYSLYLDKNSQGKFGIHRYSGRVFLISPLDYEEKTWYTLTVKASDT KHQTDANLTVMVEDVNDNMPTFTQDLYQVALAEHSPPGTPIITVTATDRDSGENGRVTYR LISSSKEGFYIDSSNGTLFISQKAAFDPERPTVRVVIEAHDGGKPSLSAIATVQVQLTDV NDNAPMFHQLEYRATVSEDQLPGGTILTLEAVDGDLSQENSGFDFAIASGNVGNAFQIES SVRFIEGHGFQTVGTLILAEQLDFEVTSRYNLTIVVSDRGVPQRSSSVPAIITVNDVNDN PPAFSRAEYVVSLSEGASAGSEILRLSATDPDSAPNAEIQYSITSGDDMGLFSVDQWTGA LRLQKTLDRETQPSHVIIIQASDGHGHFALAPINVEVKDINDNRPYFPIETMTASIRENQ PPNSAVTVLHAIDHDTGVYGQLKYFILDRSSQGKDFFMVDQNTGEVRSRQIFDFEKVSSF HFKALAMDAGNNSATVSVQVYVTGEDEYDPVFTSSAFSFEVPEGAQKGQSIGQVQANDED GGVDGIVLYSLPSSSPYFDVNKTTGVIYLKMDSASSSSGQSRSKREARLMTMDVIAHSPL ETSRVTTAQLSIDVTNTSFGLANDFNILLISIIATSLGVIVILVIIAVALYLVKSRHKKQ GQNTGTAASDTALQQLDESKSAGGERIYHQTLPGYAGEQGGGGASYTRGGSLDPSHSSGR GSAEAAEDDEIRMINEYPRVASITSSMQEHISARGPDSGIQQDADQLSDISGETGTLDAS QWFKGKKLGSLSGTMLSGQVPVYRDEGGGYLGVGRGLNISHPKDYGFPEDGKPSVDGSLT AIVASDEELRGSYNWDYLLNWCPQFQPLASVFTEIARLKDESLPPNNPRRPFQPKIKTDP KPRIDPPPLITSVAHPGAKSVPPKPAITRTFPHLATLKRSPISHEGSISSAAMSPSFSPS LSPLAARSPAVSPFGVTQGPSASMISTTEHSLKHSDDTEMRI NT seq 9849 nt NT seq  +upstreamnt  +downstreamnt atgaagttattcagaggctctggggacaatagcttgagactaaggatgtttctacttgtt tttttgactgtggaattgttaacagtaatggtcaatgtggatgcaacagcaagcatcctg gagttacagttggatgaagagcagcctgcaggaacaatagtgggtgacatcagtgctggg ttaccaccaggagaaaaggcctccctctacttcatctctgatcatgagggcactagcgtt ggaactgacctccacattgatgagaccactggcattatcaagactgctcggcgtctggac cgggaagagagagaccattatagctttattgcagttaccatgaccggcctcacagtgaag gtatccatcacagttaatgacattaatgatcatgctccagtgttccccaagaataaggcc tatttgaagatccctgagcagactgcagtggggacaaggttttccttggagccagccact gatgctgacaaagatcagctcaccactcagggatatctcatcaaagatggaaatgtgggg caggtgttcagactggaaactaagagggcagcaaataaggttctttacttggatctggtg gtcaatggtgtccttgaccgagaaaagagggcttcttactctttggttttggaggccttt gatgggggatctcctaaaaaaacagggcaactgactctggatgtgacggtgcaggatatt aatgaccatgctccggtttttaatcagagcagatatcatgccatcatctctgaaagtctc cctcaaggtagcaatatcctacaagtgtttgcctcagatgcagatgaaggtgacaatggc cttgtgctttacgaaattaaccgtaggcaaagtgaccctgatcgatactttgtcattgac cctcgttctggaattatcacactcaacaagcctttggactatgaagtcagaaaggtccat gagcttgttgtacaagccaaagacaatgccagccacccagagatcactaatgcatttgtc actatccatgttcgtgactacaatgataatcagccaaccatgaccatcatctttctcagt gaggatgggtcacctcgaatatctgagggtgcccagcctggacaatatgttgcccgtatc tcagtctcagaccctgattatggtgaatattcaaatgtcaacgtctctctggaaggcggg gatggtaagtttgccctcacgactaaggacagtatcatctaccttatctgtgtggaccag gttctggatcgtgaagagagagactcatatgagcttcgggtcatggctacagattctggc accccaccacttcgagctgaatcttcttttacaatacaagtcacagatatcaatgataac cctcctctgtttgatcagcaggcatacaaacagactattccagaagtggtttacccaggt agctttgtgctacaggtaacagcacgagacaaagaccaaggcccaaatggtgatgtccgc tacagtatcctgcccaataacgggacacattctaattggttcaccattgacgctgtgaca ggtatcattaccacagctactgagctggattatgagacagatccaaaagcaagtgtcaag atagtggctacagatggtggaaagccccctttatcgtctactgccatggtggaaatcagt ctgcaggatattaatgataacaagccagtctttgggagcagcttctataatgcgtccatc aaggagaacacagctgcagggacgtgtttccttgaggtgacagctatcgatgctgatgga ggttcatttggtgcaataacctattctataggatcaggaccctccagttctcctccagga gtattcagcattaataaagagacggggcatatctgcactagtgcagccctcgaccgagac gagggatctgagagctatgagttcacggtcactgcacttgatgggggtggcctgagctca tctgcctatgtgaatgtggcattgctggacattaatgataacaggcccatgttttaccct gtaaactatgcagttagtttgagctctcagagcgctccaggaacctctgtcatcagagta tcagctcacgaccctgacgcaggagagaatggcaaagtgacatatcgcacagtgtctggc ggaggatccaacttctttacacttaacaaggacacaggggtgatctctctttcccgctcc ttgcatggaaaggccaattctgtcattacgatggtgatcacggcactggatggaggtggg ctcacagtgcccgttaatgccagagtgaacatcagtgttgtagctgggtctgtagctccc cccgtctttgagcaagcgcagtacttcttcactgtgcctgaggatgttctgaggggcaca gaagtcggtgtggtgtttgctaatagcaggaacggaggcaataaggacatctcctacacc atctcctctggtgatccagaaggctacttcactgtggacatagagacaggagctctgcgc accagcctgcctctggatcatgaggcttggccctcgctggagttggaggtccaggctcgc agcggctcccctccggtgtttgcccagacactggtccgcatcaccatcactgatgtcaat gataacgcacccaccttccttccttcatcatcagagtctctgctgctgcccgaggctacc aaaatgggaactattgtgtaccgggtaaaggctgaggaccgtgattcaggagccaatggg cagttgagcttcgatctgctttcatctgaaggccaacgcacatttagtgtggacagaagc agtggtgaaatccgcctgataggaagcctttcctatgagagtgctcctcgttatgacttg ctggtgctggccaaggactgtggcgcccctcaactcagcgcaactttcactcttgtagtg cacatacaggccgagaatgaccaggggccagtgtttgacacaatgacctatcgtgtggag ctgaaggaaaacacaccactgaacacccgtttcctgcaagtacgtgccctgagtagggat catggtggaaatggagcctcctcctcaagttccacaccactgtcctaccatctccggcct gatggggatgcagcagggtttgggatcatctcagacagcgggtggttgtttgtgaagagt gcactggacagggagggcaaaaacatctacatgctcactgtactggccagctcaggcagg ggacagctgaagaaaactggaagcgccaccgtacgggtctctgtgacagatgaaaatgat aactcaccacggttttcccaggagagggtcttccttgcagtaagggagaacctgcctgca ggaacaggatttgggagagtttcagccactgaccgtgatgctggactcaacagccggctt actttcaaactactgcatactgaccgcaacttccagatcaactctcaaactggtgagatc agtaccagggcagctctggatcgtgagcaccagtctagctaccagctggtggtggtggta caggatggaggcacccctcctcggagtgctaccggcaccgcccatgtcactgtgctagat gagaacgacaacaccccactcttaagtcacgtattgcctggcagggagctgattatccaa gtgcaggagggtctacctgctggctcactcttgggaacactgcaggctaaagacccagat gaaggagagaatggcacgatattctactcattatctggctccagagcagaacggttctct ctaaatcctaacacaggagagctgcgttcggcttccacattgagaagagctgaaaaggct gagtacagtttaactgtaattgtctcggatcgtggtgcaccacctcagagtgtctccagc atcctgcacatacaggttgctggctcagcgaaggctccacaaaaaccaaacacactatca atggcacttaacacaatggagggcaccaaaccgggctctgtcataggttcagttcaccta catgaccaacgtgatatgttgcctgatggacaggtgacttttcttgtagtaggtggcact gatcaagatggaaattttatggtggatcgtctcactggggatgtgtacttggtcagagaa ttggactatgaaatgggagctcacttcaccttgcagattgaggtggatgacttctcaaag gcctccccaagcagtcgtgtgatagtgctggatatcaatgtgcaagacagtaatgatcat gcaccacagttccctgaagaccctgtgaccattgttgtccctgagaacatgcagccaggc tcctccatttatgcgtttcaggcctctgataaggatggaagtggccccaacagtgaggta cgctactctatccagcatcattggcctgatcgatcagatcttctgttccttgatcccatc actggtgtgctcagcctgggtcaagtgctggaccatgaagagacctcaagtctttttttg gtggtccaagcaactgactcagctacagatcctagtcaaaggcgctggagctcagtcaca gcccgcatctttgtgactgatgagaatgataatgctccagtattcagctctcctacagca gtcagtgtgatggaggataagccaatgggctttgtgctgctctacatcattgcccgtgat gcagaccaaggagaaaatggcagagtgtcttaccgcattcaggcaggcaacacagcagga cgattcagtctcaatcccaacactggctctctttccattctcaaagctctggaccgtgag gaacaggacagctacaacctcactattgttgcagaggatcatgggacaccccagcactcc accactcaggtgctgtctgtccaggttattgatgtgaatgatgaggcaccgtggtttgaa ttgagtgagtatgaggtacaaatccgagagaatcagccagctggaaccaccatactcact gtttctgctactgacagagaccaaggtacaaatggacatgtatcctatggaggtgtgaca gtggaaggttttgtcatttcacctgaaactggtgtcatttcccttaccaaagtccttgac agggaacagcaggatcattacagcgtaactgtgtatgccaaagatggagggatgccccct aactttgcaaaggccaaggtgcatattacagtgctggatgagaatgataatgctccagct tttggcaggctacaatacagtctggagctgccagagaaccttactccagtagagattttt ctaattaaagctactgaccatgacagtggggacagtggccgagtggagtacagggtaatt gctggagacccagatggtgacttccagctggacagcagttccggggccttgtccacgtct cgacccctggatagagagagaaaagacaggtattctctggaagtagttgctcaggatcat ggaatcccctctcttactagcacagctactgtagaagttactgtcctggacatcaatgac aatagtcccacatttagcagtagcagctatgctgtagacatttcagaggattctgctatt gggtcactagttctggaagtgacagccaatgatgctgatgagggcaagaatggtcagatc ctatacttcctgagcaaagaagcaagaggtacattcactatagaccctgatacaggtcgg atcctcacagcttccttattggacagagagaaaatggcttcctacagcttccaagtgtgt gcagttgacttgtcccctgcagcaccccacaacaccacagtccaggtcacagtaaccatc ttggacatgaatgacaatgcacccttttttatccaagatcctctcataatcaatgtatcc agcaggagggtatctactaaccatgtggttgccactatgagagcagaagataaggacttt ggtgccaatggttcagtattctatcgttttgccaaaccggtgcaaggcttttctataaac tctctgactggagagatccaaaccactgaagcactgaacagcctgacccagaaccagtac atcctcattgtggaggctatggaccagggcagccctcctcagtcttccctgggggtggtg atcatctatgtgaaggaacagaactatgatggtatccgcttctcccgtaccgccagagac gttagcatccaggagaatgcagccaaaggtactgcagtggcacaggcacaggcgcagtat ccggatggcacccgcataggcatcacgtacagcatcttcagtggaaataaacagcagtcc ttcagcatcagctccagcacaggtgagatttgggtacaaagctccaacggcctggatttt gaggacacaccaagactccgtctagtggtgaaggctgaaacggcaacttccagctctttc atggctgtcaacctgattcttcaggacgtcaatgacaacttgcctcgatttcagctgcag aactacatagcatacatgcatgaggcacagggctatgactctccaattattcaggttgta gctgaagatgtggatcagggcccaaatggtcaggtgacctattccatccagtcttctggt cgtagcgggttgtttaaaattgaccctctgactggcagtgtcaccactgcagccatcatg gaccgtgagatctggatgcagaccaaactagtgattatggcgacagatcgtggcatcccc aagcttgctggctctgccactgtgactgtgattattgttgacctcaatgacaatagtccc acaatccctctgccaagagaagtgcgtgtgcctgaaaactcagttattggcacagagatt accatggtgactgggaacgatgttgactcgggtccagcactgtcttattctctgtatctg gacaaaaactcacagggcaagtttggaatccaccgctacagtggcagagtgtttttgatt tctccattggactatgaggagaagacatggtacacactaactgttaaagcctctgacact aagcatcagactgatgccaatctgacagtgatggtggaagatgtgaatgacaatatgcct acctttacacaagacctataccaggtggcactggcagaacattctccacctggcactcct ataattacagtaacagccacagatcgggactcaggagaaaatggaagagttacctaccga ctgatatcatcgtctaaagagggcttttacattgattctagtaatggcacattgtttatc agtcaaaaagctgcatttgaccctgagcgccccactgtgagggtggttattgaggctcat gatggaggaaagccatctctatctgccattgctactgtccaagtccagttgacagacgtg aatgacaatgcccccatgtttcatcaattagaatacagagccacagtgtctgaggaccag cttcctggcggtacaatcctgaccctggaagcagtggatggtgacctctcccaggaaaac tcaggttttgactttgctatcgcaagtgggaatgttggaaatgctttccagattgaaagt agtgttcgtttcatagaaggtcatggcttccagacagtaggcacactgatcctggcagag cagctggactttgaggtaacatctcgctacaacctcaccattgtggtatctgaccgtggt gttccccagcgcagctccagtgtgcccgctattattactgtgaacgatgtcaatgacaac cctccggcattcagtcgtgctgagtatgtggtgtctctgagtgaaggggcatcagccggt agtgaaattttacggctttctgcaactgatccagattcagctccaaatgcagagatacaa tatagcattacctctggagatgacatgggcctattctcagtggaccagtggactggagct ctgcgcctgcagaaaactctggaccgggagactcagccttcccatgtaattattattcaa gcttcagatggtcatggtcactttgcactggctcctatcaatgtggaggtgaaagatatt aatgataacaggccttacttccccattgagaccatgactgcaagcatacgagaaaaccag ccccctaattcagcagtcacagtgctgcatgccatagaccatgacactggggtctatgga cagctgaagtattttatattggacagatctagtcaaggaaaagatttctttatggtggat caaaacacaggagaggtgcgttctcgtcagatatttgactttgagaaggtgagctctttc catttcaaggctttggctatggatgcaggcaacaactctgccacagtttctgtgcaagtt tatgtcacaggggaagatgagtatgatccagttttcacctcctcagccttttcttttgag gtaccagagggagcccagaagggccagagcattggtcaggtgcaagccaatgatgaggat ggtggtgttgatgggattgtgctctactcattaccaagcagctcgccatactttgatgtc aacaagaccactggtgtgatctacctcaaaatggatagtgctagtagttctagtggccaa agccgttccaaaagggaggcacgccttatgaccatggatgttattgctcatagtccttta gaaacctcaagggttacaactgcccagctaagtattgatgtcaccaacacatcctttgga cttgcaaatgactttaacattctcctcatcagcattattgcaacctctcttggtgtaata gtcattttagtcataattgctgtggccctgtacctagtgaagtccagacacaagaagcaa gggcagaacactgggacagcggcttcagacacagcactgcagcagttagatgaatctaaa tcagcaggtggggagaggatctatcaccagacccttccagggtatgctggcgaacaggga ggaggtggagcttcctacacaaggggaggctccttggatccatcacactctagtggaaga ggatcagccgaggctgctgaagatgatgaaatccggatgataaatgagtatccacgagtg gctagcattacttcttccatgcaagagcacatctctgcacgaggacctgactcaggtata cagcaggatgctgaccagctctctgacatctctggtgaaactgggacactagatgcaagc cagtggttcaaagggaagaagttgggaagtttaagtggcaccatgctctctggtcaagtt ccagtctatagagatgaaggaggtggctaccttggagtgggcagagggctgaacatatcc catccaaaggattatggctttccggaggatggcaaaccttcagttgatggctctctcaca gctattgttgctagtgatgaggagctgcgaggaagctataattgggactaccttctcaat tggtgcccacagttccaacctcttgccagtgtttttacagaaattgccagacttaaagat gagagcctaccccccaacaacccacgtagacctttccaacctaaaatcaagacagatcct aaaccaagaattgatccaccccctctcattacatcagtagcccacccgggtgccaagtct gttccacccaagcctgcaatcactaggacatttccacacctagcaaccctcaaacgctct cctataagccatgagggttccatttcatctgcagccatgtctcccagcttctctccatcg ctgtcccctctggcagcccgatcaccagccgtctccccttttggtgttacacaaggccca tcagcctcaatgattagcaccacagagcactccctgaagcacagtgatgacacagagatg agaatttaa

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