Ictalurus punctatus (channel catfish): 108277295
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Entry
108277295 CDS
T04658
Symbol
vsig8a
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8a
KO
K06788
coxsackievirus and adenovirus receptor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03267
Virion - Adenovirus
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
108277295 (vsig8a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108277295 (vsig8a)
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
CTX family
108277295 (vsig8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
Ig_2
I-set
Ig_C17orf99
Protocadherin
Sema4F_C
Shisa
EphA2_TM
DUF4381
Baculo_11_kDa
Syndecan
Amnionless
DUF3377
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
108277295
NCBI-ProteinID:
XP_017345382
Ensembl:
ENSIPUG00000021886
LinkDB
All DBs
Position
16:25413214..25423542
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AA seq
347 aa
AA seq
DB search
MTRVPTTGPRPSSFFILLCAGSLFFRADVTLAMKITSNGPQTLQLAQGEQTTLGCTYTPG
PEDVGELDIEWTLVSPDTTQKDKVLLSYSGRSKYFHGDPELMKGVDFAVSDPSQGDASLS
IAELTALHTGTYQCKVKKAPGLDMRKITLRILERPSVPKCWVEGDEGVGTSVSLRCKSDR
GSAPIQYVWTRESGGPIPPRITQDSFLGELLIANHSVDLAGIYACEVSNAVGKERCRINL
RAVKPHNRAGVIAGVVCGCLLLIAIILIILLLLFFRCRQQRRRYEKEFSNEIREDVPAPE
SRPTSRVSSRHSRRAYSQMSQTDHHQAASTSTGYTLPKFDNKYGYIV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgttccaaccacgggaccacgtccgtcctcttttttcatcctactgtgtgca
ggaagcctattcttccgtgcagacgtaaccctggcgatgaagatcacctccaacgggcct
cagactttacagctggcacaaggagagcagacaacactggggtgtacgtacacacccggg
cctgaggacgtcggcgaactggacatcgagtggacgctggtcagtccagacaccacgcag
aaagacaaagtgctcctatcgtactcaggtagaagtaaatatttccatggcgacccggag
ttaatgaagggagtggactttgcggtgagcgacccctctcagggcgacgcctcgctctcg
atcgctgagctcacagccttgcacacgggaacgtaccagtgtaaagtgaagaaagctccg
ggattggacatgcgcaaaatcaccctgcggatcctggagcggccgtcagtaccgaagtgc
tgggtggaaggggacgagggcgtggggacgtccgtgtccctccgctgcaagtcagatcgg
ggttctgcacccatccagtacgtgtggacgagagagagcgggggtccgattcctcccaga
attacacaggattcgttccttggagaactccttatcgccaatcactctgtggacttggcg
ggtatctacgcatgtgaggtgtctaacgctgtggggaaagagcgctgtcgaatcaatctg
cgggctgtcaagcctcataacagagccggtgtgattgcaggtgtcgtgtgtggatgtctg
ctgctcattgccatcatcctcatcatcctgctgctcctcttcttccgatgcagacaacag
cgtcggcgctacgagaaggagttctccaacgagatcagggaggacgttccagcgcccgag
agccgaccgacgagccgtgtttccagtcgtcactccagacgggcctacagccaaatgagc
caaaccgaccaccatcaagcggcttccaccagcacgggatacacgctgccgaaattcgac
aacaaatacggctacatcgtgtga
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