Ictalurus punctatus (channel catfish): 108277296
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Entry
108277296 CDS
T04658
Symbol
ppp2r2ab
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04382
Cornified envelope formation
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108277296 (ppp2r2ab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108277296 (ppp2r2ab)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108277296 (ppp2r2ab)
09158 Development and regeneration
04382 Cornified envelope formation
108277296 (ppp2r2ab)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108277296 (ppp2r2ab)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108277296 (ppp2r2ab)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108277296 (ppp2r2ab)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108277296 (ppp2r2ab)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108277296 (ppp2r2ab)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108277296 (ppp2r2ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
DSE1_N
Motif
Other DBs
NCBI-GeneID:
108277296
NCBI-ProteinID:
XP_017345383
Ensembl:
ENSIPUG00000022051
UniProt:
A0A2D0SRR0
LinkDB
All DBs
Position
16:24951187..24963502
Genome browser
AA seq
521 aa
AA seq
DB search
MWIVECGRKRLKEDCWTGSEGLQLEKGGEKIKRPEHIRDLLSSTDFNYFVGAITQTSGKL
SAAEIPSLSLSLSLAMAGAGGGGNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLA
TGDKGGRVVIFQQDTENKAQCRSDYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN
AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRCRDSTTITTLRVPVFRPMDLMVEA
SPRRVFANAHTYHINSISVNSDNETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELT
EVITAAEFHPHQCNTFVYSSSKGTIRMCDMRASALCDKHSKLFEEPEDPSNRSFFSEIIS
SISDVKFSHSGRYMMTRDYLSIKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKF
ECCWSGNDSVVMTGSYNNFFRMLERTQRRDVTLEACRESCKPRQVLKPRRVCAGGKRKKD
EISVDSLDFNKKILHTAWHPHANIIAVATTNNLYIFQEKGN
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtggatagtggagtgtgggaggaaaaggctgaaggaggattgttggactggttcagag
ggacttcagcttgagaaaggtggagagaaaataaagcggccagaacacatccgagattta
ttatctagcacagattttaattatttcgttggtgcaataacacaaacctcgggaaagtta
tcagccgctgagattccctccctctctctctctctctctctcgccatggcaggtgccgga
ggcgggggcaacgacgtgcagtggtgcttctcgcaggtcaaaggagcaatcgatgatgac
gtagccgaagctgatatcatctctaccgtggagttcaaccactcaggggagctgttagcc
accggagacaaaggcggacgcgtcgtcatcttccagcaagacactgagaacaaggcacag
tgccgcagcgactacaacgtttacagcacgttccagagccacgagcccgagttcgactac
ctgaagagtctggagatcgaggagaagatcaacaagatccgctggctgccacagaaaaac
gccgcacagttcctgttgtccacgaacgataaaactataaagttgtggaagataagtgaa
cgcgataagagaccagagggttacaatctgaaagaggaggatggccgctgcagagattcg
accaccattactactctacgggtacccgtgttcaggcccatggacctgatggtggaggcg
agccctcggcgtgtgttcgcgaacgctcacacttaccacatcaactccatctcagtaaac
agcgacaacgagacgtacctgtccgccgacgacctgcgcatcaacctgtggcacctggag
atcaccgaccgcagcttcaacatcgtggacatcaagccggccaacatggaggagctgacg
gaggtgatcacggcggccgagttccacccgcaccagtgcaacaccttcgtctacagcagc
agcaaaggcaccatccgcatgtgcgacatgcgcgcctccgccctctgcgacaaacactcc
aaactgttcgaggagccagaagaccccagcaaccgctctttcttctcagaaatcatctct
tccatctcggacgttaagttcagccacagcggccgctacatgatgacccgagattatctg
tccatcaagatctgggacctgaacatggagagccggccagtggagacgtatcaggttcac
gaatacctcaggagtaagctgtgctcgctctatgaaaacgactgcatcttcgacaagttc
gagtgctgctggagcgggaacgacagcgtggtgatgacgggctcatacaacaacttcttc
cgcatgctggagcgcacgcagcggcgagacgtcaccctggaggcgtgccgtgagagctgt
aagccccggcaggtgctgaagccgcggcgcgtgtgcgctggcgggaagaggaagaaggac
gagatcagcgtggacagcctggacttcaacaagaagatcctgcacacggcctggcacccg
cacgccaacatcatcgccgtggcgaccaccaacaacctctacatcttccaggagaagggc
aactag
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