Ictalurus punctatus (channel catfish): 108277304
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Entry
108277304 CDS
T04658
Symbol
rab38b
Name
(RefSeq) ras-related protein Rab-38
KO
K07923
Ras-related protein Rab-38
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108277304 (rab38b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ipu04031
]
108277304 (rab38b)
Membrane trafficking [BR:
ipu04131
]
Others
Specific organelles associated proteins
Melanosome
108277304 (rab38b)
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rab Family
Rab29/32/38 [OT]
108277304 (rab38b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
ATP_bind_1
AAA_7
PduV-EutP
AAA_22
TniB
TsaE
cobW
DUF4998
AAA_16
Motif
Other DBs
NCBI-GeneID:
108277304
NCBI-ProteinID:
XP_017345400
Ensembl:
ENSIPUG00000011906
UniProt:
A0A2D0SSW2
LinkDB
All DBs
Position
16:complement(11816290..11823178)
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AA seq
210 aa
AA seq
DB search
MQSSQKEHLYKILVIGDLGVGKTSIIKRYVHQTYSTNYRATIGVDFALKVLNWDSETVRL
QLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPTTFEAVTKWKEDLDSKLTLANGKSIT
TVLLANKCDQSKDILVNNGLKMDQFCQENGFVGWFETSAKENLNINEAANFLVKHIIASE
NDILKSVVPDTISPQLTTTTKMSCAACFKP
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcagtcagaaagaacacttgtataaaatcctcgttatcggggatttaggtgtg
ggcaagaccagcatcattaagcgctatgttcatcagacgtactcgacgaactacagagcc
actatcggggtggacttcgctctcaaagttcttaactgggactcggagactgtgagactg
cagctctgggacatagcaggtcaggagcgctttgggaacatgacgcgggtgtactacaga
gaggccatgggggcgttcattgtttttgatgtcaccagacctacaacatttgaagcagtc
accaaatggaaggaggacctggactcaaagttgacacttgccaatggcaaaagcattacc
acagtacttctggccaacaagtgtgaccaaagcaaagacattctggttaataatggtctg
aagatggaccagttctgtcaagaaaatggatttgtaggatggtttgaaacctcagctaag
gaaaatctaaacatcaacgaagctgcaaatttcctggtcaagcacatcattgccagcgag
aatgatattctcaaatcagtggttccagacaccatttcccctcagctgaccacaaccacg
aagatgagctgtgctgcatgtttcaaaccctaa
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