Ictalurus punctatus (channel catfish): 108277340
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Entry
108277340 CDS
T04658
Name
(RefSeq) ciliary neurotrophic factor receptor subunit alpha
KO
K05059
ciliary neurotrophic factor receptor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108277340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ipu04050
]
108277340
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
108277340
Cytokine receptors [BR:
ipu04050
]
Interleukin receptor families
IL6/12 receptor family
108277340
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
Receptors
108277340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FN3_IL27B_N
fn3
Ig_3
FN3_DSCAM-DSCAML_C
Ig_5
Ig_2
I-set
V-set_CD47
Ig_SEMA-3_4_7A
Motif
Other DBs
NCBI-GeneID:
108277340
NCBI-ProteinID:
XP_017345469
Ensembl:
ENSIPUG00000024885
UniProt:
A0A2D0SRZ5
LinkDB
All DBs
Position
16:complement(20325312..20509509)
Genome browser
AA seq
359 aa
AA seq
DB search
MANVVTSVCYVVLAAVVVVYAQRRGQQGGRIQYARIGSNVTMQCGSLDNDASVTWKVNGT
DVKAKRREEGPRLILMEVDMSSNGLYSCFQNPDGQRRDQITFRIGLPPREPQVTCRSNTY
PKGFYCSWHLLHPTYIPTEFEVDVQHNQKSLEVKRDDAHKNRCHVKFPELFSSFPYRVNV
TAINELGRASTAISFEESNMVKPDPPEKVVARPIPNNARRLEVTWNSPSTWPDIDSFPLK
YFLRYRPLIRDQWQHVELSDSTSHTITDAYVGKEYIIQLAAKDMEIGTWSDWSVAVHATP
WTEEPKPITSTTEADLPIETTPSAAPPSPRPRVGGATGGCNVLLCSSHILLACVLLSMM
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgttgtgacgtcggtgtgctacgtggtgctcgcagccgtggtggtggtgtat
gcccagcgacgcggccagcaaggaggcaggatccagtatgcgaggatcggcagcaatgta
acaatgcagtgtgggtctctggacaatgatgcctcagtcacgtggaaggtgaatgggaca
gatgttaaggccaagcggagggaggaagggccacgacttattctcatggaggtggacatg
agtagcaatggcctatacagctgtttccagaatcctgatggccaacgtcgtgatcagatc
acatttcgcattggacttcctccgagggaaccgcaggtgacgtgccgatcaaacacgtac
cccaagggcttctactgcagttggcacctcttacatcccacatacatccctacggaattt
gaagtcgacgtccaacacaaccagaagtctctagaagtgaaaagggacgatgcccataag
aacagatgccatgtgaagtttcctgagctcttctctagctttccttaccgagtcaacgtc
acggcgatcaacgagctcgggagagcatccacagctatcagcttcgaggagtcaaacatg
gtgaaaccagatcctccagagaaggtggtggccagacccattcccaacaacgcacgaagg
cttgaggtgacctggaacagcccatccacatggccggacatcgattccttccctctgaag
tacttcctgcgctaccgtccgctgatcagagaccagtggcagcatgtggagctctcagac
agcacctcccacaccatcacagacgcttacgtggggaaggagtacatcatccaactagct
gctaaggacatggagatcggcacttggagtgactggagcgtagctgtgcacgcaacaccc
tggacagaggaacccaaacccatcacctccaccacagaggcagacttgcccatagagacc
acgccatctgctgccccaccctcacctaggcccagagtgggtggtgctacaggaggatgc
aatgtcctcctctgctcatcccatatcctcctggcgtgtgttctgctgtccatgatgtga
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