Ictalurus punctatus (channel catfish): 108277353
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Entry
108277353 CDS
T04658
Name
(RefSeq) probable inactive glycosyltransferase 25 family member 3
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00310
Lysine degradation
ipu00514
Other types of O-glycan biosynthesis
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108277353
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
108277353
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108277353
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
108277353
Glycosyltransferases [BR:
ipu01003
]
O-Glycan biosynthesis
O-linked Gal type
108277353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
108277353
NCBI-ProteinID:
XP_017345506
Ensembl:
ENSIPUG00000020562
UniProt:
W5UJP8
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All DBs
Position
16:26196163..26208932
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AA seq
597 aa
AA seq
DB search
MKTSSMMLLWVLVFSLFCPRTESYFSEETYAEESEMQAPTLVIAIIARNAAHSLPYYLGA
LERLNYPKERISIWAATDHNIDNTTAVLREWLTVMQQYYHYVEWRPKDKPTSFAGEMGPK
HWSNGRYEHVMRLKQAALNFAKKRWADYILFADTDNILTNPDTLNLLMAENKSVIAPMLD
SQSAYSNYWCGITPQGYYRRTAEYFPTRNRYRKGCYPVPMVHSTMLLDLRKEGTENLAFY
PPHADYSWPYDDIIVFAFSCRVSEVQIYVCNKERYGYLNVPAKPHQTVEDDRINFVHLYL
EALIDGPPMYLSRYVHVPPKQMDLMGFDEVYLINLRRRPDRRERMLWSLYELEISAKVVD
AVDGAALNSSDIKILGVDLLPGYYDPFSGRTLTKGEVGCFLSHYYIWKEMVDMQMDKALI
FEDDVRFQGNFKRRLMRMMEEVEQAELDWDIIYLGRKQVNPGEEEQVEEVKNLVIAGYSY
WTLSYAISLQGAQKLINAEPISKMLPVDEFLPIMYDKHPNEDYKSHFLNRNLQAFSASPL
LVQPCHYAGDAEWVSDTETSTLWDDDNVPTDWRGTYKSLKGGAPPVGIQSAAYKDEL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctccagcatgatgttgctctgggttttggttttctctctgttttgtccccga
acagagagttatttttccgaggagacctacgcggaggagtcggagatgcaggcgcccacc
ctggtgatcgccatcatcgcccggaacgcagcgcactccctgccctattacctcggagct
ctggagagactcaactaccccaaagagcgcatctccatctgggcggcgacagaccacaac
attgataacaccaccgcagtgctgagggaatggctgaccgtcatgcagcagtactatcac
tacgtggagtggaggcccaaggacaagccgacgtcttttgccggtgaaatggggcctaaa
cactggagtaacggccgctatgaacatgtcatgaggctgaaacaggcggcgctgaacttc
gccaagaagcgctgggctgattatatcctgtttgccgatacagacaacatcctgaccaac
ccggacacgctgaacctcctcatggctgagaataagtctgtgatcgcccccatgctggat
tctcagtcggcctactccaactactggtgtggcatcacgcctcagggttattaccgtcgc
acagccgagtacttcccgaccaggaaccggtaccgtaaaggctgttaccctgttcccatg
gtccactccaccatgctactggacctgcgcaaggagggcaccgagaacctggcgttctac
ccgccgcacgccgattactcctggccctacgacgacatcatcgtatttgccttctcctgc
agagtttcagaggtacagatctacgtgtgtaataaagagcgttacggctacctgaacgtt
cccgccaaaccgcaccagaccgtggaggacgaccgcattaacttcgtccatctctatctg
gaggctttgatcgatggaccccccatgtatttatcccgctacgtgcacgttcctcccaag
cagatggacctgatgggctttgatgaggtgtacctgataaacctgcgcaggcggcccgac
cgcagagagaggatgctgtggtctctgtacgagctggagatcagcgctaaagtggtggat
gctgtggacggagcagctctgaacagcagtgatattaagatcctgggtgtggacctcctg
cctggttattacgacccgttctccggccgcacgctcaccaaaggggaggtgggatgtttc
ctcagccactactacatctggaaggagatggtggacatgcagatggacaaagcgctgatc
ttcgaggacgatgttcggtttcagggcaacttcaaacggcgcctgatgaggatgatggag
gaggtggagcaagccgaacttgactgggacatcatatacctgggcaggaagcaggtgaac
ccaggtgaggaggagcaggtggaggaggtgaagaacctggtgattgctggttattcgtac
tggacgctgtcctacgccatctcactgcagggagctcagaagctgatcaacgctgagccg
atctccaaaatgcttcctgtggacgagttcctgcccatcatgtacgacaaacatcccaac
gaagactacaaatcccacttcctgaaccggaacctgcaggccttctcagcgagccccctg
ctggtgcagccgtgtcattacgcgggcgatgccgagtgggtgagcgacacagagacgtct
acgctgtgggacgacgataacgtccctacggactggaggggcacgtacaagagcctgaag
ggcggagctccaccggttggcattcagagcgccgcctacaaggacgagctgtga
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