Ictalurus punctatus (channel catfish): 108277355
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Entry
108277355 CDS
T04658
Name
(RefSeq) chondroitin sulfate synthase 3
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ipu01100
Metabolic pathways
Module
ipu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108277355
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108277355
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
108277355
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
108277355
Glycosyltransferases [BR:
ipu01003
]
Glycan extension
O-Glycan
108277355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Glycos_transf_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
108277355
NCBI-ProteinID:
XP_017345511
Ensembl:
ENSIPUG00000003424
UniProt:
W5U7P8
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All DBs
Position
16:complement(16936306..16987585)
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AA seq
817 aa
AA seq
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MITCADLIMALRSRKAWTNVMVGLLLGFTAASWLLVPRVTELKKTSMCSPYSLGKVSEIV
RTPITSDAWPDSQRKASSRSYEEEDEDQSVDKPSHGRPIPHPRHFLYVGVMTAKKYLDSR
AVAVYKTWAPSVPGKVEFFSSHGSDSVPLPFPLPVVSLPGVDDSYPPQKKSFMMLKYMHD
HYLDKYEWFMRADDDVYIRGEKLELFLRSLNSSKPLYLGQTGLGTTEELGKLALEPGENF
CMGGPGMIFSREVLRMMVPHIGTCLREMYTTHEDVEVGRCVRRFGGTQCVWSYEMQELFY
ENYEHKKGFIEELHSSKIHNAITLHPNKRPAYQYRLHSYMLSRQISQLRYHTIQLHRESM
SMSHLSNTEVQWEDQQLGAPPSYARYQPAERADVLEWDFLNGRYLYSTSEKNMPRQGLGN
VLRSALEDTVLQVMEMINENSKVRGRVIDFKKIQYGYRRVNPLHGAEYILDLMLLYKRHK
GRKVTVPVRRHVYLQQSFSRPYFNEPEQLDVAELVEAINSDFQSFSLLSNSLKIFYPFQF
SELNRETREQGQKKLHILVPLTGRYDTFVRFMDNFEKVCLNSNQNVKLIIILVDNDSNQD
KEKHLDLIKDYHNKYPKADLSVIPMTGEFSRGLALEMGASGLNNNSLLFFCDVDLVFSSD
ALQRCRDNAIEGRQAYFPVVFSQYNPKIVLAGSHTEDSNFVFTKKTGFWRDYGFGITCIF
KGDLLKAGGFDTSIQGWGLEDVDLFTKIINSDLKVFRSQEPGIVHVFHPVQCDTNLEPKQ
YKMCLGSKASTYASAMQLAELWLEKHLGVGYRNRTSS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctgtgctgatctgatcatggcattgaggtctagaaaagcgtggacgaatgtt
atggtcgggcttttgctcgggttcactgcagcatcctggctcctggtgccccgggtcact
gagctcaaaaagacctccatgtgctcaccgtacagtctgggtaaagtttccgaaatagta
agaacgcccataacaagcgacgcctggcccgacagccagcgcaaagcatcttccagaagc
tacgaagaggaggatgaggaccaaagcgtggacaagccaagccatggacgacccattccc
catcccagacacttcctctacgttggagtcatgactgccaaaaagtatctggactcaaga
gcagtggccgtgtataagacatgggcgccgagcgtcccaggaaaggtggagttcttctcg
agccacggctcggactccgtgccacttcctttcccgctgccggtggtctcgctgccaggc
gttgacgattcgtatccaccacagaagaagtccttcatgatgttgaagtacatgcacgat
cactacctggacaaatacgagtggttcatgagggcggacgatgacgtctacatccgaggt
gaaaagctggagctcttcttgcgctcgctcaacagcagtaagcctctgtatctgggacag
acaggtctaggcaccacagaagaactgggcaagttggcactggagcctggagagaatttt
tgcatgggtggcccgggcatgatcttcagccgagaggtgctgcgcatgatggtgcctcac
attggcacctgtctgagggagatgtacacgacgcatgaggatgtagaggtgggccgctgt
gtccggcgatttgggggaacccagtgcgtctggtcatatgagatgcaggagttgttctat
gaaaactacgagcacaagaaaggcttcattgaggaactgcacagcagcaagattcacaac
gctatcactctgcaccccaacaagcgtccagcttaccagtaccgtctgcacagctacatg
ctcagccggcagatctcgcagctgcgctatcacaccatccagctgcatcgtgagagcatg
agcatgagccacctcagcaacacggaggtacagtgggaggaccagcagctgggcgcgccc
ccttcctacgcccgctaccagccagccgaacgagcagacgtactcgagtgggatttcctt
aatgggaggtacctgtactctactagcgaaaagaacatgcctcgacagggtctcggaaac
gtgctgcgctctgccttagaggacacggtgctccaggtgatggaaatgatcaatgagaac
tccaaagtccgaggccgtgtcattgacttcaaaaaaatccagtatggttacaggagggtg
aatcctctacatggtgccgagtacatcctggatcttatgctgctctataagaggcacaaa
ggacgaaaagtgacagtgccagtccggagacatgtctacctgcagcagtcctttagtagg
ccttactttaatgaacctgagcagctagatgttgctgaactagtggaggcaatcaatagt
gacttccagtctttttcgcttctctcgaattcactcaagatcttttacccttttcagttt
tcagagttgaacagggaaacacgagagcagggtcaaaagaagctgcacatcctcgtaccg
cttacaggccgttatgatacattcgtgcgtttcatggacaactttgagaaggtctgcctt
aattctaaccagaatgtaaaactaatcatcatcctggtggataatgatagcaaccaagac
aaggagaagcatttggacttgattaaggactaccataataaatatcccaaagcagatctg
tctgtaataccaatgacaggagagttttctaggggtctcgccttagaaatgggtgcctct
ggccttaataataactccctgctatttttctgtgatgtggatctggtcttcagtagtgac
gcactccagcgatgtagagacaacgccattgaagggagacaagcctattttcctgtcgtg
ttcagccagtacaatcccaaaatcgtcctggctgggagccatactgaagacagcaacttt
gtcttcaccaaaaaaactggcttctggcgagattatggcttcggcatcacctgcatattc
aaaggcgacttgctaaaagctggaggttttgacacttcgatacaaggctgggggctggag
gatgtcgacttgttcacaaagatcattaactccgatttaaaagtgttccgttcacaagaa
cccggtatagtgcacgtgtttcatcctgtccaatgcgatactaatctagagcccaagcaa
tacaaaatgtgcctggggtccaaagcgagtacgtatgcatctgcgatgcagttagccgaa
ctgtggctggagaaacatttaggcgtaggatacaggaacagaacttcctcctga
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