Ictalurus punctatus (channel catfish): 108277415
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Entry
108277415 CDS
T04658
Name
(RefSeq) probable asparagine--tRNA ligase, mitochondrial isoform X1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108277415
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ipu01007
]
108277415
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108277415
Enzymes [BR:
ipu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
108277415
Amino acid related enzymes [BR:
ipu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108277415
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108277415
Prokaryotic type
108277415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
SSB_1
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
108277415
NCBI-ProteinID:
XP_017345636
Ensembl:
ENSIPUG00000020892
UniProt:
A0A2D0ST13
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All DBs
Position
17:complement(14479297..14495017)
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AA seq
490 aa
AA seq
DB search
MMAATVTLLGRSLVTSRLCACVIVSKRLYCSSGKRIRVHDALNSLEAGSAIRIQGWVRSV
RSQKHNLFLHVSDGSSLQPLQVVASSDLNTRDITFGCAVDITGSLEKSPSKKQSVELQAS
RIEVVGECNPVDFPFKIKGHHSLEYIRQFPHLRCRTNAFSSLLRIRSQATAAIDSYFRDN
NFVQIHTPVITSNDCEGAGELFQVEPAGKEGNEWNSDKENPHFFSVPAYLTVSGQLHLEV
MAGAFPAVYTFGPTFRAENSQTRRHLAEFYMVEAEIAFTESLKDLMKVMEGLFKTTTENL
LSHCAEDVELFHKYVSPGYMEQVDLMMKRNFNVISYTEAIDILNCSSEQFTFKPEWGCDL
QTEHEKYIVQHCGNVPVFVTDYPYELKPFYARDNQDQPRHTAAAVDLLVPVVGELCGGSL
REERLELLRTRLAKAGLDDTYAWYLQLREFGSVPHGGFGMGFERYLQCVLGIDNIKDTIP
FARFSHSCVL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagctactgtaacgttactggggagatcactggtcacatcacgcctctgtgct
tgtgtcatagtgagtaagcggctttactgcagctcaggaaagagaattagggtacatgat
gccctcaacagcctagaggcaggctcagccatcagaatacagggttgggttcgctctgtc
cgatcacagaagcacaatctctttctgcacgtgagtgatggaagttctttgcaacctcta
caagtagtagccagctcagacctcaacaccagagacatcacctttggctgtgctgtcgat
attactggaagcttggaaaagagtcctagcaaaaaacagagtgtggaattacaagccagt
cgcattgaagtggttggagaatgtaatcctgtggactttccatttaagattaagggccac
cattccctggagtacatcagacagtttcctcacctgagatgccgaacgaatgctttcagt
tcattgctcagaattcgcagccaagccactgctgccattgactcttatttcagggataac
aactttgtacaaattcacacgccggtgattacatcaaatgattgtgaaggagcaggagaa
ctctttcaggtggaacctgcaggtaaggaaggtaacgaatggaactcggataaagaaaat
cctcattttttctccgtgcctgcatacctaactgtctctggacagctgcatctggaagtg
atggcaggggcttttcctgctgtttacacatttggcccaacatttcgagcagagaattcc
cagacaaggagacacttggctgagttttacatggtggaggcagaaatcgctttcacggag
tcactgaaggacctcatgaaggttatggagggtctgttcaagacaaccacagagaatctg
ctctctcactgtgcagaggatgtggaattatttcacaaatacgtctcaccaggatatatg
gaacaagtggacctcatgatgaaaagaaactttaatgtcatttcctatacagaggcgatt
gacattctaaactgcagttcagagcaatttaccttcaagccagagtggggctgtgatctg
cagacagagcatgagaagtacatagtgcagcattgtgggaatgtcccagtcttcgtgacg
gattatccatatgagctaaaacctttctatgccagagacaatcaagaccagcctcggcac
acagcagcagcagtagatctcttggtgcctgttgtgggggagctttgtggtggatctctc
cgagaggaaagactagagcttctaaggactcggctcgcaaaggctggattagatgacaca
tatgcatggtatcttcagctgagagagttcggatcagtgcctcatggtggttttgggatg
ggcttcgagaggtacctgcagtgcgttttaggaatcgataacatcaaggacactattccg
tttgcaaggttttcacactcctgtgttctatga
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