Ictalurus punctatus (channel catfish): 108277417
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Entry
108277417 CDS
T04658
Symbol
ncam1b
Name
(RefSeq) neural cell adhesion molecule 1b isoform X1
KO
K06491
neural cell adhesion molecule
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ipu04514
Cell adhesion molecule (CAM) interaction
ipu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
108277417 (ncam1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108277417 (ncam1b)
04517 IgSF CAM signaling
108277417 (ncam1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108277417 (ncam1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108277417 (ncam1b)
04090 CD molecules [BR:
ipu04090
]
108277417 (ncam1b)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108277417 (ncam1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
108277417 (ncam1b)
04091 Lectins [BR:
ipu04091
]
108277417 (ncam1b)
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
108277417 (ncam1b)
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
NCAM1/2
108277417 (ncam1b)
CD molecules [BR:
ipu04090
]
Proteins
108277417 (ncam1b)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
108277417 (ncam1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
Others
108277417 (ncam1b)
Lectins [BR:
ipu04091
]
I-type lectins (Siglecs)
108277417 (ncam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
Pur_ac_phosph_N
C2-set_2
HTH_Tnp_Tc5
Motif
Other DBs
NCBI-GeneID:
108277417
NCBI-ProteinID:
XP_017345639
Ensembl:
ENSIPUG00000013304
UniProt:
A0A2D0SSG7
LinkDB
All DBs
Position
17:7522836..7635492
Genome browser
AA seq
1047 aa
AA seq
DB search
MRENRVMAMFLTKEIILIFLFLGSAASLQVSIMPAQGEVSVGESKFFLCEVVGAVKRIDW
FSPSGEKIESSRQDITVIRNDETSSTLTIYNAIIDNAGTYKCVATSGDQQAEATVNVKIY
QKITFKNVTSPQEFTEGDDAIIVCDVISSPPPTIMWKHKRAKIQFDKDVRFKNLDNNHLQ
IRGIRKADEGVYTCEARIMARGEIDFRDIRVVVNVVPTIRVRQAEVNATADISHSAMLAC
DADGFPEPTITWMRSLRREVLLESGDKYSFNEDGSEITIMDVKKLDEGDYTCIARNKAGM
SEEEVGLRVFVKPKITYLENQTTTEMEEQIRLTCEATGDPTPSITWSFGTHVFAEGEQEH
LKRIYQASWTRPEQHKSEDGSVVVRSDARVSSLTLKYVQYTDAGQYLCTASNAVGQTSQS
TFLEVRYAPKILGSVAVYTWEGNPANISCEILAHPSDVSIIWLRDGLQLPNANSTNVKIY
TTPTASYLQVNPDSQNDFGSYNCTASNEIGTESKEFILIQADVPSAPTITQVNPYSSTAE
VLFDEPEASGGVPVLKYHAEWRVGNKNKWVQRIYEVREGLSAVTITGLKPDTKYEVKMSA
INGKGEGESSSIVAFKTEPVREPSPPKLEGAIQSKGNVLKVKWIKQDDGGSPITHYLIRY
KAREDLAWKDEVRVPSTSGHILLSGLDWNTEYDVTVVAENQQGKSQPGLLNFRTSSEPST
TPDYVEDGPGLSTGLIVGILILVCVVLLLAVDATCCFVNKCGLLMCLCAKSGTSPKGKDV
EAGKAAFVKDDSKEPIVETRKKDGLTANHDVGGHTEPNETTPLTEPERQTEVASTVVDLP
LSLATNSDTVTDTFDLSQSSPVSESTTLTSSLTAPPSEPKSTPKTSSQPLDTSLLSSEPP
LVDLADSQTSIQSAGQIKSAEIDTQAPPSLAHSTEKEARDLDAEPMLLGSPQPRTIVTNP
QISGVHPSSEDLELQIDGDASLTHFPQDGLHSLATAASTDPSTPQNEKVLEEEEEIRDEE
DELKKVQQEELAEPNAIWQANASEIKA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaaaccgagtgatggcaatgtttctgaccaaggagataatcttgatctttctt
ttcctgggcagtgcagcctctctacaagtgagcattatgcctgcacaaggagaagtaagc
gtcggagagtccaagtttttcttgtgtgaagttgtcggtgcagtgaagagaatcgactgg
ttctcaccgagcggcgagaagattgaatccagtaggcaggacatcacagtgatccgcaat
gacgagacatcctctacgctcactatctacaatgctatcattgacaatgccggcacgtac
aagtgtgtagccaccagcggagaccagcaggctgaggccacagtgaacgtgaaaatatac
caaaagattaccttcaaaaatgttacatcaccccaggagtttactgagggggacgacgcc
atcatcgtatgtgatgtgattagctccccaccacccactatcatgtggaaacacaaaagg
gcaaaaatccagtttgacaaagatgttcggttcaagaatttggacaataaccacctgcag
atcagagggatcagaaaggcagatgaaggagtgtacacctgtgaggcccgcattatggct
cgaggagagattgatttccgtgatatcagagttgtagtaaacgttgttcccactatcaga
gtgcgacaagctgaggtgaacgccaccgcagacataagccactctgccatgctggcctgt
gatgcagacggcttccctgaacctacaatcacatggatgcgctctctccggcgtgaggtt
cttctggagagcggggataagtacagcttcaatgaagatggctcagagatcacaataatg
gatgtgaagaagctagatgaaggagattacacctgcattgccagaaacaaagctgggatg
agtgaagaagaagtcggactcagagtttttgtgaaacccaaaatcacatacttggaaaac
caaaccactacggagatggaggagcagatcaggttgacgtgtgaagccacaggagacccg
acacccagcatcacgtggagcttcggtacgcacgtatttgccgagggagaacaggagcat
ctaaagaggatttatcaggcatcttggactcgacctgaacaacacaagagtgaagacggg
agtgtggtggtgcgcagtgacgcccgtgtctcttctctgacactaaagtacgtacagtac
accgacgctggacagtatctctgcacggctagcaacgctgtaggccagacctcccagtcc
acgttccttgaagtgcgctacgcaccaaagatcctgggctcagtagcagtctacacgtgg
gaggggaatcctgccaacatcagctgcgagatcctggctcacccgagtgatgtgtctatc
atatggctgcgagatggactccagctacccaacgccaactccaccaacgtcaaaatctat
acaacccccactgccagctacctgcaggttaacccggactcccagaatgactttggcagc
tataactgcaccgcttctaatgagatcgggaccgagtccaaagagttcatcctgattcag
gctgatgttccctcggctccgaccatcactcaggtgaatccctactcaagcacggctgag
gtactgtttgatgaacctgaagcttctggaggagttcccgtgctcaagtaccatgccgag
tggagggtagggaacaaaaacaaatgggtccagcgcatctatgaagtccgagaggggctg
agtgcggtcacaatcacgggcttaaaaccagacacgaagtatgaagtcaagatgtctgct
atcaacggcaagggagaaggcgagagcagctctatagttgccttcaagacagaacctgtt
cgggagcccagtccccctaaactggagggagccatacagtcaaaaggcaatgtacttaaa
gtcaagtggatcaagcaggatgacggaggctcgcccatcacacactacctcatccggtac
aaagctagagaggacttggcctggaaagacgaggtccgtgtcccgagcacaagtggacac
atcctcctaagcggcctggactggaacactgagtatgacgtgacggtggtggccgagaac
cagcagggcaagtcacaacctggcttgttgaactttcgcacgtcctctgagccctccacc
actccagactacgtggaggatggcccaggcctaagtacagggctgattgttgggatcctc
atcctggtgtgtgtggtcctgttgttggccgtggacgccacctgctgcttcgtcaacaag
tgtggcttgctaatgtgtctctgtgccaaatccgggaccagtccaaagggcaaggatgta
gaggcaggaaaggctgcatttgtgaaggacgattccaaagagcccattgtagaaacgagg
aaaaaggatgggctcacagccaaccatgatgtagggggacacaccgagccaaatgagacc
acgccccttactgagccagagcgacaaacagaagtcgcgtctactgtggtggatttgccc
ctgtccttggccaccaactcagacacagtcactgacacatttgacctcagtcagagcagc
cctgttagtgagagcaccactctcacctccagcctcacagctcctccttctgagcccaaa
tccacccctaaaacgtcctcccagcccttagacacttcactcctctcatctgagcctccc
ttagtcgatctggctgattctcagaccagtatccaatcagctggtcaaattaaatctgca
gaaatcgacactcaggctccaccttctcttgctcatagcacagagaaggaagcccgagat
ctggacgcagagccaatgcttttaggaagtccacagcccagaacgattgtcactaatcca
cagatcagtggtgttcatccctcctcagaggatcttgagctccaaatagatggagatgcc
tcactaacacatttcccacaggatggcttacactctctggctacagctgcctctactgac
ccatcgactccacaaaacgaaaaagtcctagaggaggaggaggagattagagatgaggaa
gacgagctgaagaaggtccagcaggaagaactggcagaaccaaatgcgatatggcaagca
aacgcctctgagattaaggcatga
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