Ictalurus punctatus (channel catfish): 108277648
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Entry
108277648 CDS
T04658
Symbol
gdpd5b
Name
(RefSeq) glycerophosphodiester phosphodiesterase domain-containing protein 5
KO
K28873
glycerophosphocholine phosphodiesterase [EC:
3.1.4.2
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
108277648 (gdpd5b)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
108277648 (gdpd5b)
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Motif
Pfam:
GDPD
YczF
Motif
Other DBs
NCBI-GeneID:
108277648
NCBI-ProteinID:
XP_017345938
Ensembl:
ENSIPUG00000014617
UniProt:
A0A2D0STC1
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All DBs
Position
17:22379741..22439247
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AA seq
579 aa
AA seq
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MVKHQPLQVYERQLCLSCLTGIYGCRWKRYQRSHDDTTKWECMWTLILFGTFTLLLFWFY
FWWEASNDYSEFNWYLYNRSGEWSDGTVPILATTAAGFTYIAFLMILALCHISVGQQLNL
HWIHKIGVTAALLTTVIGMISVSQIWSKEWDIFSISLQATGPFLHIGALAAVTALAWLVA
GQVARSEKTKFQVIVLLIYLVVLLSLYLTPLSITSPCIMEPHDLKARPAVIGQRGAPMLA
PENTLLSFRRALQKNVSGLEAEVAISLDGVPFLMRDRTLRRTTDVSKVFPERQNDDASFF
NWTELSMLSAGQWFLKDDPYWTLKYMSAQERWAMENESVCSLEQMLHLASVYNCSALFTL
RRPPPGHPHHLNWVNLTLTTVLHSGIPQHLVVWSVDWDRELVQQQAPGFQQISTKIQTLE
NLHEKGISRLLLRYDHVSDEDIRTYTAGNVSVTLYTVNEPWLYSVLWCSGVHSVSSEAPQ
ILKKVLSPLWIMSPDEYCVIWVATDLVSFALVLGIFVFQKWRMSGMRSYNPEQIMLSATV
RRSSRDVNIMKEKLIFSEVSDGVSYEENGFDCYTNQGVH
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaacaccaacccctgcaggtctatgagagacagctgtgcttgtcttgtctaacg
gggatctacggttgccgctggaaacgttaccagcgctcacatgatgacaccacaaagtgg
gagtgtatgtggaccctcatcctcttcgggacgttcactctgctgctgttctggttttat
ttctggtgggaagcaagcaatgactacagcgagtttaactggtatttatataaccggtca
ggcgagtggagtgatggaactgttcccatactggctacaacggctgcaggcttcacttat
attgcatttttaatgattttagcactatgtcacatctcagttggacagcagctgaacctg
cactggatccataagatcggagtgactgcagctttactgaccaccgtgatcggcatgata
tccgtcagtcagatctggagcaaggaatgggatatcttctcgatctctctacaggccaca
ggacccttcctgcacatcggtgctcttgctgcagttacagcgttggcctggctggtggct
ggacaagtagctcgatctgagaagaccaagtttcaggtaatagttctgctcatctacctg
gtggtgcttctgagcctctacctgaccccgctgtccatcacatcgccctgcatcatggag
ccgcacgaccttaaagcgcggcctgctgtaatcggccagcgcggagctcccatgctggct
ccggagaacacgctgctttctttccggagagctctgcagaagaacgtcagtgggttggag
gcagaggtggccatcagtctagatggagtgccgttcctgatgagagatcgtaccctgagg
agaaccacagatgtgagcaaagtctttcctgagagacagaatgacgacgcctcgttcttc
aactggactgaactgagcatgctcagtgctggccagtggtttctaaaggatgacccgtac
tggacgttgaagtacatgtctgcgcaagagcgctgggcaatggaaaatgagtcagtgtgc
agtctggaacagatgctacacctggcatccgtctacaactgctcagccctgtttaccctc
cgcagacctcctccaggacacccacaccacctgaactgggtcaacctcaccctgaccacc
gtcctgcactcgggcatccctcagcacctggtggtgtggagtgtggactgggacagagag
ctggtacagcagcaggctccaggcttccagcagatctccactaagatacagacgctggag
aatctccacgagaaaggcatcagcagattattgctgcgctacgaccacgtcagtgacgag
gatatacggacgtacacagctggtaatgtgagtgtgactctgtacactgtgaatgagccg
tggctgtactctgtactctggtgcagcggcgtgcactccgtctcctccgaagcaccgcag
atcctcaagaaggttttatcacctctctggataatgagtccagacgagtactgcgtgatt
tgggtcgccacagatctcgtctccttcgccctggtcctggggatttttgtatttcagaag
tggaggatgagtggcatgcgtagctacaacccggagcagatcatgctgagcgccactgtc
aggaggtcgagccgagacgtcaacatcatgaaggagaagctcatcttctctgaggtcagc
gatggggtcagctatgaggaaaacgggttcgactgctacaccaatcagggcgttcactga
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