Ictalurus punctatus (channel catfish): 108277694 Help Entry 108277694         CDS       T04658                                  Symbol col4a3 Name (RefSeq) collagen alpha-5(IV) chain   KO K06237   collagen type IV alpha Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu04510   Focal adhesion ipu04512   ECM-receptor interaction ipu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ipu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108277694 (col4a3)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     108277694 (col4a3)   09142 Cell motility    04820 Cytoskeleton in muscle cells     108277694 (col4a3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ipu04147]     108277694 (col4a3)    00536 Glycosaminoglycan binding proteins [BR:ipu00536]     108277694 (col4a3) Exosome [BR:ipu04147]  Exosomal proteins   Exosomal proteins of other cancer cells    108277694 (col4a3) Glycosaminoglycan binding proteins [BR:ipu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108277694 (col4a3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  108277694 NCBI-ProteinID:  XP_017346004 Ensembl:  ENSIPUG00000001563 UniProt:  A0A2D0STI7 LinkDB All DBs Position 17:complement(3700539..3744338) Genome browser AA seq 1656 aa AA seqDB search MRATPVGILFLGFVTLAHTEECGVNRKPECDCSVVKGEKGEQGFPGLIGSQGEDGFSGDE GQPGPPGFMGDPGIPGFPGPKGSRGLPGKPGSWGPAGIPGLPGDEGPQGPPGSPGCNGTK GERGSPGLPGLPGSVGLQGENGPPGPKGDTDSFPYPEDVIGEKGLPGRDGPKGEPGQPGD CGPMGPMGRVGLEGKRGYPGIPGEKGVEGPRMIGPRGAKGVRGFPGIPGERGIKLFHEVH RELKGEPGDPGHRGSPGIAGDRGLCGPKGEKGCTGDPGPLGEDGANGLEGEYGLNGSPGD KGYRGPPGIPGLKGEKGDCGCSGPPGDCLPRNTLEKGQRGHKGFPGPPGLTGFQGVSGFP GKTGVPGLGTPGKSGDRGPPGLSGIKGEKGESASQTVGPIGRDGARGQPGPYGDPGPEGL LEICNGPPGLRGNKGMQGPVGETGEHGEQGEKGDLCRLCPYSGPTRAHSGPPGIRGPTGK PGANGISGNKGSMGIKGQEGAPGNPGLVGAPGIQGKQGPKGDPGFVGPGAIGDQGDPGSQ GLPGKSGQNGIPGRPGFQGPRGDKGNPGPFGAKGNKGESGSKGLPGFLGEMGVQGCPGVG ATGEAGDKGSFGVRGLPGDPGDPGEKGDPGLVIITPGDPGKCGTKGLKGPPGEPGCLGPK GLCGQPGPCGIKGENGLSQPGLQGPPGCKGEKGIQGHQGPPGIGEPGCPGPTGQCGIPGL KGNSGYGNPGPTGRRGPPGEDGTIGPIGESGCNGIAGVFGQAGRAGCPGPRGDTGYDGPP GVTGPAGVCTSGWPGATGVQGQKGMPGSTGCRGQTGMQGESGYQGQGLPGSAGTFGAPGL NGQSGPPGLAGTKGLKGNNGMPGCTGPRGNDGPAGEPGCPGPSGSPGCPGPPGSKGMAGS DGLPGCRGPRGQKGNRGDPGPKGEPQTVYNPGDPGDPGCIGPSGLTGLKGDSGIKGPTGR CGQHGSQGSPGAPGPPGERGLDGLPGEPGVDGCVGEVGLSGSPGPKGAKGTPGQNGTPGD PGTPGVNGPKGDKGEPSSPGPGEQGYPGEKGEPGIQGLNGKKGERGCIGPVGIPGSEGIR GVVGETGLPGQPGSPGFPGEKGLDGQPGPLGRPGPVGPPGCSGSPGDPGPQGLKGNQGSD GIPGLAGEKGNAGAPGYGPPGPAGVRGKPGCKGEPGAMGETGPPGKCGAVGDPGPCGEPG PPGPLGNPGAQGLCVDGPKGERGPPGQPGSQGPRGICGPPGQPGLGFKGDKGNTGTSGPR GVCGCPGDTGPQGIPGYAGSDGYPGPKGETGQKGDTGSRGQRGRDGSHGQPGNQGEKGPK GPPGVPGADDYYRIMHIPGDRGLPGPPGKTGPPGVTGSPGLKGAIGAPGPKGLPGQDGFP GLQGLRGQKGSRGLAGLPGDLGFTGEDGQKGSRGLPGPCLTNSARDSFLFTKHSQTQDIP YCPSGSSKVYSGYSLLFINANKRGHGQDLGTMGSCLQMFSTMPFLFCNSDNVCRYASRND YSYWLSTGTPMPSDLPSISGDTLAQYVSRCSVCDAPGNVIAFHSQNNTVPSCPIGWRSLW QGYSYVMQSGVGSEGSGQPLSSPGSCLENFQRIPFIECLGRGTCNYYSDAYSYWLAALDP SQMFSKPSPRIVKEDYPSIISRCQVCMKEPSCNQSS NT seq 4971 nt NT seq  +upstreamnt  +downstreamnt atgcgcgcgacaccagtgggaatattgttcctcggatttgtgacgctcgcgcacaccgag gaatgtggcgttaacaggaagcccgagtgcgactgcagtgtagtcaaaggagaaaagggt gagcaaggctttccaggtctgattggatcacaaggggaagatggattttcaggagatgaa ggccaacctggacccccgggcttcatgggtgacccaggaataccaggttttccaggaccg aaaggctcacggggactccctgggaagccaggatcctggggtcctgcaggaatacctgga ctcccaggagatgaaggccctcaaggacctcctggtagcccgggatgcaatggcacaaag ggtgaacgtggttcacctggattgccaggacttccaggatctgtcggcttacagggtgaa aatggtccccctggccctaagggagacacagactccttcccatatcctgaagatgtgatt ggagaaaaaggtttgccaggtagagatgggccaaagggtgagcctggacaaccaggtgac tgtggaccaatgggaccaatgggacgtgtgggacttgaaggcaaaagaggataccctggc attccaggagaaaagggtgtagagggacccagaatgattggcccccgaggtgcaaaaggc gtgagaggttttcctggcatacctggtgagaggggtatcaaactatttcacgaagtacac agagagctcaaaggagaaccaggggatccgggacacagaggcagccctggaattgcaggc gatcgaggactttgtggccctaaaggagagaaaggatgcacaggagatccaggacctctg ggggaagatggggcaaacgggctggagggagagtacggtctgaacggctctcctggtgac aagggatatagggggcctcctgggatccctggtttaaagggggagaaaggtgactgtggt tgctctggtcctccgggagactgtcttccacgcaatacactcgagaaaggccaacgagga cataagggcttccctggacctcctggccttacagggtttcaaggtgtaagtggctttcct ggaaaaacgggcgttccaggactaggtacacctggaaagtctggggatcgtggtccccca ggcttaagtggaattaagggtgaaaagggagaatcagcatctcaaacagtaggaccaata ggacgtgatggagctcggggacaacctggaccttatggtgaccctggtcctgaaggacta ttagaaatatgtaacggcccaccggggttgagaggaaataaaggcatgcaagggcctgtg ggtgaaactggagaacatggggaacaaggtgagaaaggagacctctgcagactgtgccct tattcaggccctacacgtgcacattcagggccacctggtatacgtggtccaactggaaag ccaggtgctaatggaatatctggcaacaaaggatcaatgggtattaaagggcaggaaggt gcacctggcaatccgggtttggttggtgctccgggcattcaagggaaacagggaccaaaa ggagaccctggctttgtaggacctggggctattggggaccaaggtgatccaggatctcag gggctcccagggaagagtggacagaatgggataccgggaagaccaggatttcaaggccca aggggagacaagggaaatccgggtccttttggggctaaaggcaataagggcgagtctgga tcaaagggattaccaggattccttggtgaaatgggagtccagggctgccctggggttgga gcaacaggggaagctggtgacaagggcagctttggtgtacgtggcctgccaggggatcct ggagatccaggtgagaaaggtgaccctggtttggtgatcataacacctggagatccaggg aagtgtggaacaaagggtcttaaaggtccacctggggaaccagggtgtcttggacccaaa gggttatgtgggcaaccaggaccttgtggtataaaaggcgaaaatggattgtcacaaccg ggtttacaaggaccacctggttgtaaaggtgaaaaaggcattcaaggtcatcaaggtcca cctggcattggagaacctggttgtccaggacccacaggacaatgtggaataccagggtta aagggcaatagtggttatggaaatccagggcccactggcaggcgagggcctccaggggag gatgggacaattgggcctattggtgaatcgggttgtaatggaatcgctggagtttttgga caggcagggagagctgggtgcccagggcctaggggtgacacaggatatgatggacctcca ggggtgactggtccagcaggagtctgtacttctgggtggccaggtgcaacaggagtccaa ggtcagaaaggaatgcctggaagtacaggatgtcggggtcagacaggtatgcagggtgag tccggatatcaggggcaaggtttacctggttctgctgggacatttggggcacctggttta aatggacaatctggtccacctggtctagccggaacaaagggtttgaaggggaataatggc atgcctggttgcacaggcccacgggggaacgacgggcctgccggcgaacctggatgtcct ggaccttctggaagccctggatgtcctggaccacctgggtctaaaggtatggctggcagt gatggcctaccaggttgcagaggtccacgaggccagaaagggaatcggggggatccaggt cctaaaggagaaccgcaaactgtctacaatcctggcgacccaggagaccccggatgcata ggtccttctggtctgactgggcttaaaggggacagtggaatcaagggcccaactggcaga tgtgggcaacatggatcacaaggcagccctggtgcaccgggtcctcctggagaacgaggc ctggatggcttaccaggtgagcctggtgtcgatggctgtgttggagaagttggactttcg ggttccccaggtcccaaaggtgccaaggggacacctggtcaaaatggaacaccaggagac cctggtactccaggcgtaaatggcccaaaaggggacaaaggtgaaccaagttctcctgga ccaggagagcaaggataccctggagagaagggtgagccaggcatacaaggccttaatgga aagaaaggagaaagaggatgcattggccctgttggtattccaggatcagaagggattcgc ggcgtggttggcgagacaggactaccaggacaaccaggatccccaggatttcctggagaa aaaggtttagatggacagccaggccccctaggtcgtccgggaccagtaggcccaccaggt tgttctgggtcaccgggcgatccgggtcctcaaggtcttaaaggaaaccagggcagtgac ggcattcccggattagctggagaaaaagggaatgcaggagctcctggatatggacctcca gggccagctggtgtcagaggtaaaccaggttgtaaaggggaaccaggagccatgggggaa actgggcctccaggaaaatgtggtgcagtaggagacccagggccctgtggtgaaccaggg ccgccaggaccccttgggaatcctggtgcgcagggtttgtgcgtggatggccccaaggga gagcgaggacctcctggacaaccaggatcacaagggcccagagggatatgtggtccccca ggacaacctggtctaggctttaagggagataagggcaacactgggacttctggaccacgt ggagtgtgtggttgcccaggagacactggtccacaagggattccaggttatgctgggagc gatggttaccctggtcccaaaggagaaacaggacaaaagggtgacactggatctcgaggt caaagaggaagggatggctcacatggccaaccaggaaatcaaggagaaaaagggccaaaa ggaccaccaggtgtaccaggggcggatgattactacagaatcatgcatattcccggagac cgtggtctgcctggacctccaggaaagactggacctcctggagtaaccggttcaccagga cttaaaggggcaataggagcccctggccctaaaggacttcctggccaagatgggttccct ggtcttcaaggtttacgtggacagaaagggagcagaggattagcagggttgccaggagat ttgggttttactggtgaagatggtcagaagggttccaggggtctaccgggaccctgcttg accaacagtgcccgagatagcttcctgttcaccaagcacagtcagacacaagacatccct tattgccctagtggatccagtaaagtctactctgggtactcactcctttttatcaacgcc aacaaacggggacacggccaagatcttggcactatggggagctgtctacagatgttctcc accatgccattccttttctgtaatagcgataatgtctgtcgctatgcctcccgaaacgac tactcctattggctgtccactggcacacccatgcccagtgacctgccctcaatctcaggt gataccctggcgcagtatgttagcaggtgctcagtatgtgacgctccaggtaatgtgata gcgtttcacagccagaacaatacagtcccatcatgccccattggatggcggtctctgtgg caaggctactcttatgtcatgcaatcaggtgtgggttccgagggctcgggtcagcccctg tcgtctcctggatcctgtctggagaatttccagaggattccctttatcgagtgtcttggc cgtggtacttgtaactactactcagatgcctacagctactggctggccgctctggatcct agccagatgttcagtaaaccatccccgcggatagtaaaagaggactacccgagcatcatc agtcgctgtcaggtgtgcatgaaggagccgtcttgtaatcagtcatcctga

DBGET integrated database retrieval system