Ictalurus punctatus (channel catfish): 108277698
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Entry
108277698 CDS
T04658
Symbol
ppp2r1bb
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
ipu04110
Cell cycle
ipu04114
Oocyte meiosis
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04350
TGF-beta signaling pathway
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108277698 (ppp2r1bb)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108277698 (ppp2r1bb)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108277698 (ppp2r1bb)
04114 Oocyte meiosis
108277698 (ppp2r1bb)
09144 Cellular community - eukaryotes
04530 Tight junction
108277698 (ppp2r1bb)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108277698 (ppp2r1bb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108277698 (ppp2r1bb)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108277698 (ppp2r1bb)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108277698 (ppp2r1bb)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108277698 (ppp2r1bb)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108277698 (ppp2r1bb)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108277698 (ppp2r1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_EZ
PDS5
Htt_N-HEAT_1
Cnd1
Adaptin_N
CLASP_N
M11L
HEAT_ECM29
ARM_ARMC5
DUF3730
Motif
Other DBs
NCBI-GeneID:
108277698
NCBI-ProteinID:
XP_017346011
Ensembl:
ENSIPUG00000012183
UniProt:
A0A2D0SU20
LinkDB
All DBs
Position
17:8113942..8130433
Genome browser
AA seq
589 aa
AA seq
DB search
MAGAEGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIY
DEDEVLLALAEQLGNFTMLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRKISQEHS
PVDLEVHFEPLVKRLASGDWFTSRTSACGLFSVCYPRVSSTVKAEIRQYFRTLCSDDTPM
VRRAAASKLGEFAKVLELDYVKSDIIPLFTALASDEQDSVRLLAVEACVSIATLLLQEDL
EGLVMPTLRQAAEDKSWRVRYMVADKFSELQQAVGPEITKNDLVPAFQSLLKDCEAEVRA
AAANKVKEFCENLPEDNRENMIMNHVLPCVKELVSDTNQHVKSALASVIMGLSTILGKDN
TVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR
LAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATCNLMKLVEKFGAEWAQN
TIVPKVLGMANDPNYLHRMTTLFCINALSEACGQEITTKHMLPIVLKMSNDQVANVRFNV
AKCLQKIGPVVDGNSLQTEVKPVLEKLATDQDMDVKYFAQEAISVLALA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcagaaggagacgattcgctgtatcctattgcagttttaatcgacgaatta
aggaacgaagatgtccagttgcgcttgaacagcatcaaaaagctatcgactattgccttg
gccctgggtgttgagcggacacgcacagagcttctacccttccttactgacactatttat
gatgaggatgaggtgcttcttgccctggctgagcagctggggaacttcaccatgctggtc
ggagggccggagtacgtgcactgcctcctgccaccgctggagagcctggccactgtggag
gagacagtggttcgagataaagctgtggagtcactgcgcaagatctctcaggagcactca
cccgtagacctcgaggtgcactttgagcccctggtgaaacgattggccagcggggactgg
ttcacatcacgcacgtctgcttgtggcctgttcagcgtctgctacccacgcgtctccagc
accgtcaaggccgagatccgccagtacttccgtaccctttgctcggatgatacgcccatg
gtgaggcgtgctgctgcttccaaactgggcgagtttgccaaggtactggagctggactat
gtaaagagtgatatcatcccgctttttacagcgctggcttctgatgagcaggactctgtg
cggcttctagcagtcgaagcttgcgtcagcatcgccaccctgctgctccaagaggacttg
gagggtcttgtgatgccaacgctccgccaggctgccgaggataagtcatggagggtgcgc
tacatggtagcggacaagttctctgagttgcaacaagcagtgggtccagaaatcaccaag
aatgatctagtcccagcatttcagagtttactgaaagattgtgaggcagaggtgcgggct
gcagctgcgaataaggtgaaagagttctgtgaaaatttgccagaagacaaccgtgagaat
atgatcatgaatcatgtcctgccttgtgtcaaggagctggtgtcagacacaaatcagcac
gtgaagtctgccttggcctccgtcatcatgggcctctccactatcctgggcaaggacaac
accgtggagcatctgctcccccttttcctggcccagctgaaggacgagtgtcccgaagtg
cgtctgaatatcatctccaacctggactgtgtgaacgaggtgataggcattcgccagctt
tctcagtccctgctgcccgctattgtggaactggcagaagatgccaaatggagggtgcgt
ctggccatcattgagtacatgccgctgcttgcaggccagctgggagtggagttctttgat
gagaagctgaattctctgtgcatggcttggctggtagaccatgtttatgcaattcgggag
gcggccacttgtaacctgatgaagctggtggagaagtttggagcggaatgggctcagaac
accattgtgcccaaagtgctcggcatggctaacgaccccaactacctgcacaggatgacc
acacttttctgcatcaatgccctttctgaggcatgtgggcaggagatcaccaccaagcac
atgctacccatcgtcctaaagatgtccaacgaccaggttgccaacgtgcgcttcaacgta
gccaaatgcctacagaaaattggaccagtcgtagacggcaactccctgcagacggaggtg
aagccagttttagagaagctcgccacagaccaagatatggacgtgaagtactttgctcag
gaagctataagtgttctcgccctggcctga
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