Ictalurus punctatus (channel catfish): 108277698
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Entry
108277698 CDS
T04658
Symbol
ppp2r1bb
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
ipu04110
Cell cycle
ipu04114
Oocyte meiosis
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04350
TGF-beta signaling pathway
ipu04382
Cornified envelope formation
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108277698 (ppp2r1bb)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108277698 (ppp2r1bb)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108277698 (ppp2r1bb)
04114 Oocyte meiosis
108277698 (ppp2r1bb)
09144 Cellular community - eukaryotes
04530 Tight junction
108277698 (ppp2r1bb)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108277698 (ppp2r1bb)
09158 Development and regeneration
04382 Cornified envelope formation
108277698 (ppp2r1bb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108277698 (ppp2r1bb)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108277698 (ppp2r1bb)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108277698 (ppp2r1bb)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108277698 (ppp2r1bb)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108277698 (ppp2r1bb)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108277698 (ppp2r1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_EZ
PDS5
Htt_N-HEAT_1
Cnd1
Adaptin_N
CLASP_N
M11L
HEAT_ECM29
ARM_ARMC5
DUF3730
Motif
Other DBs
NCBI-GeneID:
108277698
NCBI-ProteinID:
XP_017346011
Ensembl:
ENSIPUG00000012183
UniProt:
A0A2D0SU20
LinkDB
All DBs
Position
17:8113942..8130433
Genome browser
AA seq
589 aa
AA seq
DB search
MAGAEGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIY
DEDEVLLALAEQLGNFTMLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRKISQEHS
PVDLEVHFEPLVKRLASGDWFTSRTSACGLFSVCYPRVSSTVKAEIRQYFRTLCSDDTPM
VRRAAASKLGEFAKVLELDYVKSDIIPLFTALASDEQDSVRLLAVEACVSIATLLLQEDL
EGLVMPTLRQAAEDKSWRVRYMVADKFSELQQAVGPEITKNDLVPAFQSLLKDCEAEVRA
AAANKVKEFCENLPEDNRENMIMNHVLPCVKELVSDTNQHVKSALASVIMGLSTILGKDN
TVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR
LAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATCNLMKLVEKFGAEWAQN
TIVPKVLGMANDPNYLHRMTTLFCINALSEACGQEITTKHMLPIVLKMSNDQVANVRFNV
AKCLQKIGPVVDGNSLQTEVKPVLEKLATDQDMDVKYFAQEAISVLALA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcagaaggagacgattcgctgtatcctattgcagttttaatcgacgaatta
aggaacgaagatgtccagttgcgcttgaacagcatcaaaaagctatcgactattgccttg
gccctgggtgttgagcggacacgcacagagcttctacccttccttactgacactatttat
gatgaggatgaggtgcttcttgccctggctgagcagctggggaacttcaccatgctggtc
ggagggccggagtacgtgcactgcctcctgccaccgctggagagcctggccactgtggag
gagacagtggttcgagataaagctgtggagtcactgcgcaagatctctcaggagcactca
cccgtagacctcgaggtgcactttgagcccctggtgaaacgattggccagcggggactgg
ttcacatcacgcacgtctgcttgtggcctgttcagcgtctgctacccacgcgtctccagc
accgtcaaggccgagatccgccagtacttccgtaccctttgctcggatgatacgcccatg
gtgaggcgtgctgctgcttccaaactgggcgagtttgccaaggtactggagctggactat
gtaaagagtgatatcatcccgctttttacagcgctggcttctgatgagcaggactctgtg
cggcttctagcagtcgaagcttgcgtcagcatcgccaccctgctgctccaagaggacttg
gagggtcttgtgatgccaacgctccgccaggctgccgaggataagtcatggagggtgcgc
tacatggtagcggacaagttctctgagttgcaacaagcagtgggtccagaaatcaccaag
aatgatctagtcccagcatttcagagtttactgaaagattgtgaggcagaggtgcgggct
gcagctgcgaataaggtgaaagagttctgtgaaaatttgccagaagacaaccgtgagaat
atgatcatgaatcatgtcctgccttgtgtcaaggagctggtgtcagacacaaatcagcac
gtgaagtctgccttggcctccgtcatcatgggcctctccactatcctgggcaaggacaac
accgtggagcatctgctcccccttttcctggcccagctgaaggacgagtgtcccgaagtg
cgtctgaatatcatctccaacctggactgtgtgaacgaggtgataggcattcgccagctt
tctcagtccctgctgcccgctattgtggaactggcagaagatgccaaatggagggtgcgt
ctggccatcattgagtacatgccgctgcttgcaggccagctgggagtggagttctttgat
gagaagctgaattctctgtgcatggcttggctggtagaccatgtttatgcaattcgggag
gcggccacttgtaacctgatgaagctggtggagaagtttggagcggaatgggctcagaac
accattgtgcccaaagtgctcggcatggctaacgaccccaactacctgcacaggatgacc
acacttttctgcatcaatgccctttctgaggcatgtgggcaggagatcaccaccaagcac
atgctacccatcgtcctaaagatgtccaacgaccaggttgccaacgtgcgcttcaacgta
gccaaatgcctacagaaaattggaccagtcgtagacggcaactccctgcagacggaggtg
aagccagttttagagaagctcgccacagaccaagatatggacgtgaagtactttgctcag
gaagctataagtgttctcgccctggcctga
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