Ictalurus punctatus (channel catfish): 108277704
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Entry
108277704 CDS
T04658
Symbol
vtna
Name
(RefSeq) vitronectin a
KO
K06251
vitronectin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04512
ECM-receptor interaction
ipu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108277704 (vtna)
04518 Integrin signaling
108277704 (vtna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108277704 (vtna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108277704 (vtna)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108277704 (vtna)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108277704 (vtna)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108277704 (vtna)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
108277704
NCBI-ProteinID:
XP_017346022
Ensembl:
ENSIPUG00000023271
UniProt:
W5US52
LinkDB
All DBs
Position
17:complement(16520450..16526828)
Genome browser
AA seq
492 aa
AA seq
DB search
MKLELLLLLLALLQTGHTAEESCIDRCDSGFDATKQCQCDSLCKYYRSCCTDYASLCDNL
TRGDTFPSFPEDEVNSSAVSPTLSGDNINTMTLPSSLINQPTVFTTSPLTLDPDAEVCSG
RPFNSFMQLKNGSLYAFRGKYFFELDERAVLPGYPKLIEDFWGIKGPIDAAFTRINCQGK
TYIFKGSKYWRFDNGLLDEDFPRDISVGFENIPDHLDAAFAIPAHIHNGKEKVYFFKGDR
YYQYEFKHQPSHEECIQMSKIFPSTLFRRYTDLYYDRWAEHFSQLFSGFIESQHGNHFIS
KDWIGIKSPVDAVLAGRLYVSPRYLQRPSKRRQDQLGGQHQNQQWNQQLNQQWNQDWSQQ
WDQQWNQQQLGSRRRQNRSPFWDTMGERGVGIRQEFRQIFDQDNWRDQDRRRNGYQQQYD
NDYDYKYNPSEDATFNRIRWSRPLQSVYFFKGDQYYRFNLQTKRVDYAIPSYPRPISKYW
LGCSNSPGAEKR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgagctgctgctcctgctgcttgcactgctgcaaaccggccacaccgcagag
gagtcttgcattgaccgatgtgatagcggctttgatgcaaccaaacaatgccaatgtgac
tctttatgcaagtactacaggagctgctgcactgattatgcgtcactctgtgacaatttg
actcgtggagacacttttccatctttccctgaggatgaggtgaacagctcggccgtgtca
ccaacactcagtggtgacaacataaacacaatgaccctgccttcatctcttatcaatcaa
ccaactgtattcactacatctccactaaccttggaccctgacgctgaggtgtgcagtggc
aggccgtttaattctttcatgcaactcaaaaatggctcactctatgccttcaggggaaag
tatttcttcgaactggatgaaagggccgtgttgccaggttatccaaaactcattgaagac
ttttgggggataaaaggtcctatagatgcagcatttacacgcataaactgccaaggaaaa
acatacatctttaagggaagcaagtactggaggtttgacaatggactcctggatgaagat
ttcccaagagatatctctgttggatttgaaaatatcccagatcacttagatgctgccttt
gctatccctgctcacatccacaatggcaaagagaaggtctacttctttaaaggtgaccgt
tattatcagtatgagtttaagcaccagccatcccatgaggagtgcatacagatgtccaag
atcttcccgtcaacactcttcagaagatatacagatttatattatgatcgctgggcagag
cacttcagccaactcttcagtggattcattgaaagccaacatggcaatcacttcattagc
aaagactggattggtatcaaatccccagtggatgcagtgctagctggaagactgtatgtc
tcacctagatatttacaacggcccagtaagaggcggcaggatcaactggggggtcaacat
cagaatcaacagtggaaccaacagctgaaccaacagtggaaccaagactggagccaacag
tgggaccagcagtggaaccagcaacagttgggctcgcgacgcagacagaaccgatctcct
ttctgggacactatgggtgagagaggtgttggcatcaggcaggaattcagacagattttt
gaccaggacaactggagagatcaggacagacgtaggaatggctatcaacagcagtatgac
aatgattatgactacaaatacaacccttctgaggatgcaacattcaaccgaatccgctgg
agccggccactacagagtgtctacttctttaaaggagatcagtactacagattcaattta
cagaccaagcgagttgactatgccattccttcgtaccccagaccaataagcaaatattgg
ctgggctgcagtaacagtccaggagcagagaaaagataa
DBGET
integrated database retrieval system
