Ictalurus punctatus (channel catfish): 108277706
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Entry
108277706 CDS
T04658
Name
(RefSeq) rab-interacting lysosomal protein isoform X1
KO
K13883
Rab-interacting lysosomal protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108277706
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108277706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108277706
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108277706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH1
RILP
PKcGMP_CC
Emfourin
Hmw_CFAP97
XLF_CC
NPV_P10
Motif
Other DBs
NCBI-GeneID:
108277706
NCBI-ProteinID:
XP_017346023
Ensembl:
ENSIPUG00000023256
UniProt:
A0A2D0STK6
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Position
17:16493288..16508778
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AA seq
413 aa
AA seq
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METIQTNQDDKKLNECFERTVSALTVDDVYNIAKLIGSDVEKLIDNYGRTSVESLVPKIV
KVLELLESFTASYHTQKSKEESLLRAFETLQVQQHECNKTDVRQEWQQKEQKLRLEMEAL
QKEVLHLQEENQELLGRLQSSLSKEDRTQRQEREVMLKLKEVVDKQRDELRAKVQEISKM
SKEVEALQEQLDRFMKMNGELRSKQNMMQVQLKSAAERRVDLEVDLSEKDKEIERLVAKL
EQAKADTAPNTNSPAVDMTYKVTVDPNKPCFTKQEVRDILFERNELKANLFLVQEELAFY
QREILNDERYPGFLLGAVRGAIKKQRTIIKAKMLGIPEDDCSSDEEKGPLFEKRKDEDCP
DSKPPESRIRTLFGYLSRSGSDRSGHQINSSAWEIINTEEHLPEVENGPGGSP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccatccagaccaaccaagacgacaagaagttgaacgagtgttttgagaggacc
gtttcagctctaaccgtggacgatgtgtacaacattgccaagctgatcggctccgacgtg
gagaagctcatcgacaactatggcagaacgagtgttgagagtttggtgccgaaaatagtg
aaagtgctggagctcttggagagtttcacagccagctaccacacacagaaatctaaagag
gagagtctactcagggcgtttgaaacactacaggttcaacagcacgagtgcaacaagacg
gacgttcgccaggaatggcagcagaaggaacagaaattgaggctggagatggaggcattg
cagaaggaggtgctgcacctacaggaggagaaccaagaactgctgggtcgcctgcagagc
tccctctctaaagaagaccgtacacagcgtcaggagagagaggtgatgctcaaacttaaa
gaggtggtggataaacagcgtgacgagctccgagccaaagtgcaggagatatccaagatg
tctaaagaggtggaagcgcttcaggagcagttggatcgctttatgaagatgaacggagag
ctgcggagtaaacagaacatgatgcaagttcagctgaagagtgctgcagaaaggagggta
gacctcgaggttgacctgagtgagaaagacaaagagatagagcgacttgtcgcaaagctg
gagcaggccaaggcagacactgctcctaacacgaacagtccagctgttgacatgacatat
aaggtgacggttgacccgaataagccgtgcttcaccaagcaggaagtgcgagacattttg
tttgagaggaatgagctaaaggccaatctcttcctggtgcaagaagagctcgccttctac
cagcgggagatcctgaatgatgagagatatcccggcttcttactgggagcagtgcgtggc
gctataaagaaacagaggaccatcattaaggccaaaatgctgggtataccagaggatgac
tgcagcagtgatgaagagaaaggacctttgtttgagaagagaaaggatgaagactgccct
gacagcaaacctccagaatcacggatcagaaccctctttggctacctgagccgctcaggc
agtgataggagtggacatcagatcaacagttctgcgtgggaaatcatcaacacagaggag
cacctaccggaagtggagaatgggcctggaggctctccctga
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