Ictalurus punctatus (channel catfish): 108277707
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Entry
108277707 CDS
T04658
Symbol
cltcb
Name
(RefSeq) clathrin, heavy chain b (Hc) isoform X2
KO
K04646
clathrin heavy chain
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04142
Lysosome biogenesis
ipu04144
Endocytosis
ipu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108277707 (cltcb)
04142 Lysosome biogenesis
108277707 (cltcb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108277707 (cltcb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108277707 (cltcb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108277707 (cltcb)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
108277707 (cltcb)
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108277707 (cltcb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
HEAT_Nup120
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
108277707
NCBI-ProteinID:
XP_017346026
Ensembl:
ENSIPUG00000015496
UniProt:
W5UBT5
A0A9Y8NCP7
LinkDB
All DBs
Position
17:6055143..6080470
Genome browser
AA seq
1677 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMSDPNS
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPSGN
QPFPKKAVDVFFPPEAQNDFPVAMQISPKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDAERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GHAAAQSGNWEDLVKFLLMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPSDAWKESQFKDIVTKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYQALRTSIDAYDNFDNISLAQSLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQE
EKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLDASESLR
KEEEQATEAQPIVYGTPQLMLTAGPSVAVPPQQPYGYGYGAPAGYGQPAQPGFGYSM
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccagaacctgggcatt
aacccagcgaacatcggcttcagcacgctcactatggaatcggataagttcatctgcgtg
cgggaaaaggtcggagagcaagcgcaggtcgtcatcatcgacatgagcgaccccaattcg
cccatccgcaggcccatctctgcagatagcgcgatcatgaacccggccagcaaagtgatc
gctcttaaagccgcgaaaactctgcagatcttcaacattgaaatgaagagcaagatgaag
gcgcacaccatgaccgacgacgttacgttctggaagtggatctccctgaacaccgtagcc
ctcgtaaccgacaacgcagtctaccactggagtatggaaggcgactctcagcccgttaaa
gtgttcgaccggcattccagcttagccggctgccaaattatcaactaccgcaccgacgcc
aaacagaaatggctgctgcttattgggatttccgcacagcaaaaccgtgtggtgggagca
atgcagctgtactctgtggacaggaaggtgtcgcagcctattgagggccacgctgcaggc
tttgctcagttcaaaatggaggggaacgctgaagaatccacactgttttgcttcgccgtt
cgcggccaagcaggaggaaagctgcacattattgaagtcggaacacctccgtctggcaat
cagcctttcccgaagaaagccgtcgacgtgttctttccacctgaagcccagaacgacttc
cctgtcgctatgcagatcagccccaagcaggatgtggtctttctcatcaccaaatacggc
tacatccacctgtacgaccttgaaactggcacatgcatctacatgaacaggatcagcggg
gagaccatcttcgtcaccgctcctcacgaggctacttctggcattattggtgtcaatagg
aagggacaggtgctgtcggtgtgtgtggaggaggagaacatcatcccctacatcaccaac
gtcctgcagaaccctgatctggcgctgcgcatggccgtgcgcaacaacttggctggtgca
gaggagctctttgcacgcaagttcaacactctgttcgcagggggcaactactccgaggct
gccaaagtagctgccaacgcaccaaagggcattttgaggaccccggacaccattcggcgt
ttccagagtgttcccgcccagccaggccagacctctcctctgctccagtacttcggcatc
ttgctggatcagggccagctcaacaagttcgagtccctggagctctgcaggcccgttctg
cagcagggccgcaagcagctgctggagaagtggctgaaggaagataagctggagtgctct
gaagagctgggtgatttggtgaaatctgtggacccaaccctcgctctcagtgtttatctg
agagcaaacgtccctaacaaagtcatccagtgttttgccgagactggccagttccagaaa
attgtactgtacgcgaagaaggtcggctacactccagactggatcttcctgcttcgaaat
gtgatgcggatcagtccagagcagggcctgcagttctcccagatgttggtgcaggatgag
gaaccactggctgatattacccagattgtggatgtgttcatggagtataacctgattcag
cagtgcacttccttcctgctggatgctctaaagaacaaccgacccactgaaggcccactg
cagacaaggctgttggagatgaacttgatgcatgcaccacaggtggctgacgctattttg
ggaaaccaaatgtttacccactacgaccgggcccacgtggcccagctgtgtgagaaagct
ggattgctgcagagagccctggaacactacactgacctgtatgacatcaaacgtgctgta
gtgcacacccacctgctcaaccctgagtggctggtgaacttttttggctccctgtcagtg
gaggactctctggagtgcctgagagccatgctctcggccaacatccgccagaacctgcag
atctgcgtccaggtggcttccaaatatcacgagcagctcaccacccagtccctcactgag
ctctttgagtcttttaagagctttgaaggtctgttctatttcctgggctccattgtgaac
ttcagtcaggatccagaggtccatttcaagtacattcaggcagcctgtaaaacgggacag
atcaaagaggtggagagaatctgcagagagagtaactgctacgatgctgagcgtgtgaag
aattttctgaaggaagcgaaactgaccgatcagctgcctctcatcatcgtgtgcgaccgc
tttgactttgtccacgacctggtcctttatctgtaccgcaacaacctgcagaagtacatc
gagatttacgtccagaaggtgaaccctagccgcttacccgtggtgattggtgggctgttg
gacgtggactgctcagaggacgtcattaagaacctgatcctggtggtccgaggacagttt
tccaccgatgagctggtggctgaggtggaaaagcggaacagactgaagctgttgctgccg
tggctggaagcccgtattcatgagggatgcgaagaacctgctacccacaatgccctggct
aagatctacatcgacagcaacaataatcccgagcgattcctcagagagaacccgtactac
gacagccgtgtcgtgggcaagtactgcgaaaagagggacccccatctggcttgtgtggct
tacgagagaggacagtgtgaccaagagcttattaacgtatgcaatgaaaactcgctcttc
aagagtctgtctcggtatttggtgcgtcgtaaggacccagagctgtgggccagcgttctc
ctggagagcaaccctttcagaaggccactgattgaccaggtggtgcagactgcactctcg
gagacccaggacccagaagaggtgtccgttacagtcaaagccttcatgaccgctgatctg
cctaatgagctgattgagcttctcgagaagattgttttggataactctgttttcagtgag
cacaggaacttgcaaaaccttctgatcctgactgccatcaaagccgatcgcactcgcgta
atggagtacatcaaccgcctggacaactacgacgcccctgacatcgccaacatcgccatc
agcaacgagctctttgaagaggcttttgccatcttcaggaagtttgatgtgaacacatct
gcagtgcaggttctgatcgagcacattggcaacctggaccgggcctacgaatttgctgaa
cgctgcaacgagcctgctgtgtggagccagttggctaaagctcagctgcagaaaggtctg
gtaaaagaagccatcgattcttacatcaaggctgatgacccgtcagcatacatggaagtg
ggacatgctgcagcccaaagcggaaactgggaggatttggtcaagtttttgctgatggca
cgtaaaaaggcccgtgagtcatatgtagagaccgagctgatcttcgcattggctaaaacc
aaccgcctggctgaactggaggagtttatcaacggcccgaacaatgcccacatccaacaa
gttggtgatcgatgctacgatgagaagatgtatgaggcggctaagctgctgtacaacaac
gtgtccaactttggccgcctggcctccactctggtccaccttggagagtaccaggctgct
gttgacggagcacgcaaggccaacagtacacgaacctggaaagaggtctgttttgcctgc
gtcgatgggaaggaattccgtctggcgcagatgtgcggcctgcatatcgttgtccatgct
gatgaactcgaggagctcattaactactaccaggaccgtggctatttcgaggagctgatc
accatgttggaggcggctctcgggctcgaacgtgctcacatgggaatgttcactgagctg
gccatcctctattccaagttcaaaccacagaagatgagggagcacctggaactcttttgg
tccagagttaatattcccaaggtcttgcgggcagcagaacaggctcatctgtgggccgag
ctggtcttcctttacgacaagtatgaagaatacgataacgctatcatcaccatgatgaac
cacccttcagatgcctggaaggagagccagttcaaagacattgttactaaggtggctaat
gtggaactgtattacaaagccatccagttctacctggagttcaagcctctgttactgaac
gatttgctcatcgttctgtccccaaggcttgatcatacacgcgctgttaactacttctct
aaggttaaacaactgcctctggttaaaccgtacctgcgatcagtacagaaccacaacaac
aaatcagtcaatgaagcactaaacaatctcttcataatcgaggaggactaccaggctctg
cgtacatccatcgatgcctacgacaactttgataacatatctctggcccagagcttggag
aagcacgagctcattgagttcaggagaattgctgcctaccttttcaaaggcaacaaccgc
tggaagcaaagcgtggagctctgcaagaaggataaactctacaaggatgccatgcagtat
gcgtctgagtcgaaggacaccgagctagccgaagagctgctgcagtggttcctacaggag
gagaagaaggagtgctttgccgcctgcctcttcacgtgctatgacctcctgcggcccgac
gtggtgctggagacggcctggaggcacaacatcatggacttctccatgccctacttcatc
caggtcatgagggagtacctcagcaaggtcgataagctggacgcgtctgagtctttgagg
aaagaggaggagcaggccacagaggcacaacccattgtttatgggactccccagctgatg
ctcactgcaggcccaagcgttgccgttcctcctcaacagccttatggctatggctacggc
gcccccgctggctacggtcagccagcacagcccggcttcggctacagcatgtag
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integrated database retrieval system
