Ictalurus punctatus (channel catfish): 108277719
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Entry
108277719 CDS
T04658
Symbol
zgc:162872
Name
(RefSeq) BAR_ACAPs and ArfGap_ACAP domain-containing protein
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108277719 (zgc:162872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108277719 (zgc:162872)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108277719 (zgc:162872)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108277719 (zgc:162872)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108277719 (zgc:162872)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108277719 (zgc:162872)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_5
Ank_4
BAR
STAT_alpha
Bac_globin
SOS1_NGEF_PH
DUF5764
Med2
Spectrin_Dys-1
Motif
Other DBs
NCBI-GeneID:
108277719
NCBI-ProteinID:
XP_053543141
UniProt:
A0A9F7RIW2
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All DBs
Position
17:3541239..3549794
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AA seq
697 aa
AA seq
DB search
MDYFLDFDECIRDSPVFRLSLERCENDLEELESRMEKVMRLCNKMVDDGQVFCSSSQIFL
SALDELTSHHKNNTVIENCLQQFNQALQEMIHFHTMLLDQTRRAITQQLSKLLTQFLPPL
RAARYECVRIRDELNTALVKSAQVSQHKAAEAERHTHLLLATRKCYTHCSLDYCLQLNNF
LTQQKLDVLNSVFSFFHAQNTFFHQGFDLLKDVEPTMKIMAAELSGLSAECVNRRKNLEH
QHLFVQQRDASGETVLFNGGAIEGYLFKRSRRKNKTWKRCWFSANHNQLIYTKSHKEQPL
VLFDDLRLCAVKSLDSIDRRFCFELLSVQKSCVLQADSEELKMAWMNAVQSRIDMAYRER
VQSEHTPVRDGSLPAPAPDPGPLPGPLSMVLRSHGNHRCCDCGEAEPRWASVNLGITVCI
ECSGIHRSLGVHLSKVRSLTLDSWDPEQLKLLCVLGNDVINGIYEGHLSEMEKPNSDSSR
QQKEVYIRMKYVEKKFVQGCDPHLTETVQQWAGRRLYDAALDGDIISMALALAQGGDVNW
TNAEGRTPLIGAAIGGSLVACEFLLQNAANANHRDQHGHAAIHMATTRGHTGQVCLLLKR
GANQYAADEKGKDPLSIAIETAHADIVTLLRMARMNEEMRESEGFFGSVGDDETFQDIVR
DFSNMASHDPEQLSRRHFSTPDESQEERRNGKTPEKS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggattacttcctggactttgacgagtgcatccgggactctccggtattcaggctgtct
ttggagaggtgtgagaatgatctagaggagctggagagtcgcatggagaaggtgatgagg
ttgtgtaacaagatggtggacgatggccaggtgttttgttcatccagtcagatcttcctg
tctgcgctggatgagctcacgtcacaccataaaaacaacaccgttatagagaattgtcta
cagcagtttaatcaggctctgcaggagatgatccacttccacacaatgctgcttgaccag
actcggagagcgatcacacaacaactctcaaaactactgacgcagttcctccccccactg
cgtgctgctcgatatgagtgtgtgcggatcagagatgagttgaacacggcgctggttaag
agcgctcaggtatcacagcacaaagcggctgaagcagagcgacacacacacctgctgctt
gcaacacgcaagtgctacacacactgtagcctggactactgcctacagctgaataatttc
ctgactcagcagaagctggatgtgctgaactcagttttctccttttttcatgcgcagaac
acgtttttccatcagggctttgacctgctgaaagatgtggagcccaccatgaagattatg
gcagccgagctgtctggactctcagctgaatgcgtgaacagaaggaagaacctggaacat
cagcacttgttcgttcaacagagagacgcctctggggagactgtgctgttcaatggagga
gcgattgaaggatatctgtttaaacgctcacggaggaaaaacaaaacatggaagaggtgt
tggttttcagcgaatcataatcagctgatttacaccaaatcacacaaggagcagccactt
gtgttgtttgatgatctccggttgtgtgctgtaaaatctctggactcaatcgatcgccgt
ttctgttttgagctgctatctgtgcagaagagctgtgttttacaggctgactcagaggaa
ttaaagatggcgtggatgaacgcagtgcagagccgcatcgacatggcgtacagagagaga
gtgcagtctgaacacacaccggtgagggacggttcccttcctgctcctgctcctgatcct
ggccctctacctggtcctcttagcatggttctccgtagccatggtaaccaccgctgctgt
gactgtggggaggcggagcctcgatgggccagcgtgaacctcggaatcacagtctgcatc
gagtgttccggcatccacaggagtctcggtgtacatctgtctaaggttcgttctctcact
ctggattcatgggaccctgaacagctaaagctgttgtgtgttctgggtaatgatgtcatc
aatggaatttatgaaggtcacctgtctgagatggagaaacccaactctgatagctctcgg
cagcagaaggaggtgtatatcagaatgaagtatgtggagaagaagttcgttcaggggtgt
gaccctcatctcactgagactgtacagcagtgggcgggacggagactgtatgatgcagca
ttggatggcgacatcatctccatggctctggctctggctcaggggggcgacgtgaactgg
actaacgcagagggacggacgcctctgattggtgcagcgattggaggctcattagtggcg
tgcgaattccttctgcagaatgctgcaaatgccaatcacagagaccaacacggacacgca
gccatacatatggctacaacacggggacacacaggacaggtgtgtctgctgttgaagaga
ggagccaatcagtacgcagctgatgaaaagggaaaggaccccctcagtatcgccatagaa
acggcgcacgccgacatcgttactctgttgagaatggcccgtatgaatgaagaaatgaga
gagtctgaaggattttttggatcagtgggagacgacgagacatttcaggacattgttcgt
gatttcagtaacatggcgtctcatgatccggagcagctgtcgcgcagacacttcagcact
ccggacgaatcgcaggaagaacggaggaatggaaagacgccggagaagagctga
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