Ictalurus punctatus (channel catfish): 108277724 Help Entry 108277724         CDS       T04658                                  Symbol robo1 Name (RefSeq) roundabout homolog 1 isoform X1   KO K06753   roundabout, axon guidance receptor 1 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu04517   IgSF CAM signaling Brite KEGG Orthology (KO) [BR:ipu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     108277724 (robo1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:ipu04515]     108277724 (robo1) Cell adhesion molecules [BR:ipu04515]  Immunoglobulin superfamily   ROBO family    108277724 (robo1) SSDB OrthologParalogGFIT Motif Pfam:  I-set Ig_3 ig Ig_2 fn3 V-set Ig_VEGFR-1-like_5th C2-set_2 Pur_ac_phosph_N Ig_5 FN3_DSCAM-DSCAML_C Unc5_NetrinR_N Ig_Rha78A_N Ig_PDGFR_d4 Fn3_VIN3 DUF7908 Motif Other DBs NCBI-GeneID:  108277724 NCBI-ProteinID:  XP_017346057 Ensembl:  ENSIPUG00000015850 UniProt:  A0A2D0STN8 LinkDB All DBs Position 17:20944877..21207583 Genome browser AA seq 1679 aa AA seqDB search MMAGRLLLLTLSLLSTWMTPGLCSDGDKPGKNKGGWRWKGDRSHSGTAEADKEGVTPAPA SGHDEDNTLAYTGSRLRQEDYPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDG ERVETDRDDSRSHRMLLPTGSLFFLKIIHGRRSKPDEGSYVCVARNYLGEAVSHNASLEV AILRDEFRQNPSDVMVAAGEPAVMECQPPRGHPEPTISWKKDGVNVDDRDERITIRGGKL MITNTRKSDAGKYVCVGTNMMGERDSEIAELTVLERPSFLRRPSSQSVLVEQSVEFRCEA QGDPVPTVRWRKEDGELPKGRFEIRDDHTLKLKRLSSADAGSYTCLAENMMGKAEATATL TVHVMSVPPVFAVRPRNQVVGLGRTVTFQCEATGSPQPAIFWQREGSQNLLFSSQPPQSS SRFSVSQTGDLTITGVERGDSGYYSCQALNIAGSVITKALLEVTDIISDRPPPVIRRGPT NHTVPVDGTVVLGCKVLGTPPPTILWKKDGVLVSTHDSRVKQLDSGALQIRSAKFGDMGV YTCVASSPSGEASWKSYLEVQEFGIGVQPGRPTDPNLIPSAPSKPEVTDVTRTTVSLSWK PDLHSGATPTSYIIEAFSHASGSSWHTLAEHVRTENYVLKGLKPSAVYLFLVRAANAYGL SDPSPISDAIKTQEIPPTSQGVEHGQIQRELGDVVIHLHNPTILSSSSIRVQWTVEQQSQ YMQGYKVMYRVSSDSGQTRSDWAVFEVRSPAEYTAVISQLRKGTTYEFKIRPFFNEFQGT DSDVKVGKTLEEAPSAAPRGVTVTQNGDNGTAILLSWQAPPEDERNGVVQEYRIWCLGNE SRFHINRTVDGSTFSTVISGLVPGIRYGVEVAASTGAGPGVKSELTHFQLDSSGKMTQSV VDPDDTLSQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRSGLSTSYAGIRKVP SFTFTPTVSYQRGGEAVSSAGRPGLLNISDSATQPWLADTWPNNCSNQNDCSINCCTAGN GNSDSNLATYSRPADCIANYSQMDSKPTNLLVPDSSLYGDVDLSNKINEMKTFNSPNLKD GRLVGPAGQPTPYATTQLIQSSLGTNHVGSADLNEKQNWKGSQGTPQKQQEVTSQLQYSI MEQNKLNKASDHYRSGDPGMPATIPYNQAPDPNPNAGTYSSSDRGSSTSGSQGQKKGGRT TKVPKQSAMNWADLLPPPPISPPPCQDYGISMDDSYEAELKCPVPPSRMYLQPDELEEEE ADMERGPTPPVRGTASSPAAVSYSHQSTATLTPSPHEEMQPMLMENPENLHERRRQLVSP PPPPRPVSPSHTYGYISGPLGLDTDGLEDEEEGDDTDAEVPLVHQRYLHALVPGNPHGVH PRLTLRGLDQTPASSTCELDSSVTGSMINGWGSASEEDSGSSGRSSVISSSDGSFFTDAD FAQAVAVAAEYAGLRVAKHSGKGPPHYTGPGARKYQNLPSGHRPASPFSTDSNMSAAVVQ KRPPKKQKQQAAGLYQRREAYTDDLPPPPIPPPAMLKSPTHPSKAAAETGRRSSSAESRD KRDKKPRDASDTRTSSSERRDAQERQRAQRAGKSSKPEPSAGRQHQEDIVPYSRPSFPAV HSPRGEREPSSSSSMSSRGSGGRRKGEGVAGSRRNPAEISLNTVGAFHPGEEQLEMAES NT seq 5040 nt NT seq  +upstreamnt  +downstreamnt atgatggcggggcgactgctcctcctcactttgtcgcttctgagcacttggatgacaccc ggactttgctcggacggggacaagccggggaagaacaagggtgggtggagatggaaaggg gacaggtctcactcgggcactgcagaggcggataaggaaggggtcactccggcccccgcc tcaggacacgatgaagacaacaccctggcctacacaggatctcgtctgcggcaggaggac tacccgccccgcatcgtggagcatccctctgacctgatcgtgtccaagggcgaacctgcc accctcaactgcaaggccgaggggcggcccacgcctacggtggaatggtacaaagatggc gaaagggtggagacggatcgggacgactcgcgttcccatcgcatgctccttcccaccggt tctctgttcttcctgaaaataattcacggccgtcggagcaaaccggacgaaggctcgtac gtctgcgtggcccgcaactatctcggagaagccgttagccacaacgcgtcgctggaagta gccattctccgtgatgaattcaggcagaaccccagcgatgtgatggtggccgctggagaa ccggcagtgatggagtgccagcctcctcgcggacacccagaacccaccatctcctggaag aaagatggcgtgaacgtagacgacagagatgaacgtataacaatccgaggcgggaagctg atgatcaccaatacgaggaagagtgacgccgggaagtacgtgtgtgtgggaacaaacatg atgggggaacgggacagtgagatcgccgagctcaccgtgcttgagagacccagtttcctg cgcaggccgagcagtcagtcggttctggtggagcagagtgtggagttcaggtgcgaggcg cagggagaccccgtccccaccgtccgctggaggaaagaggatggagaacttcccaaggga aggttcgagatccgtgatgaccacactctgaagctgaagaggctgagctcggccgacgcc ggctcctacacctgcctggctgagaacatgatggggaaggcagaagccacagccaccctc accgtccacgttatgtctgtgcctccggtgtttgcggtgcggccgaggaaccaggtggtc gggttgggacgcaccgtgacttttcagtgcgaggcaacgggaagcccacagccagccatc ttctggcagagagaggggagtcagaacctgctgttctcctctcagcctcctcagtcctcc agccgcttctccgtctctcagactggtgatctgaccatcactggagtggagcgcggagac agcggttactacagctgccaggcgctcaacatcgcaggaagcgtgatcactaaagctctg ctggaggtcactgatattatttcagaccggcctccgcctgttatccgtcggggacccacc aatcacacggtgcctgtcgatggtacggtggttctgggatgcaaggtgctgggaacgcct ccacccaccatcctgtggaagaaagacggagtcctggtgtccactcatgactcccgggtc aagcagctggactcgggcgctctgcagatccgctccgccaagtttggagacatgggtgtg tatacatgtgtagcttccagtcccagcggagaagcatcatggaagtcctacctggaagtt caagagtttggtattggagtccagcctggacgacccaccgaccccaacctgatccccagc gctccctccaaacccgaggtcaccgatgtcactcgcaccaccgtgtctctgtcctggaag cctgacctccactccggagccacgcccacatcgtacatcatcgaggccttcagtcatgca tcaggcagtagctggcacactctagcagaacatgtgaggactgagaactatgtgttgaaa ggcctgaagcccagcgctgtctacctgttcctggtccgagcggctaacgcatacggactg agtgacccgagtcccatcagcgatgccataaaaacccaggaaattcctccaaccagtcag ggagtggagcacgggcagatccagagggagctcggggacgttgtcatccacctccacaat ccaaccatcctttcctcctcctccatccgtgtgcagtggacagtggagcagcagtcccag tacatgcagggctataaggtgatgtaccgcgtgtcgtcagactcagggcagacgcggagc gactgggccgtgtttgaggtcaggagtcctgccgagtacacggccgtgatctctcagctc cgcaaaggcaccacctacgagttcaaaatacgacccttcttcaacgagttccagggcacg gacagcgacgtcaaagtgggcaagacgctggaggaagcccccagcgcagcacccagaggc gtgaccgtcacacagaatggagacaacggcacggccatcctgctgtcctggcaagcacct cccgaggacgagcgtaacggagtggtgcaggagtacaggatctggtgtttgggaaatgag agtcggttccatatcaaccgcacagtggacggttctaccttctccacagtgatctcaggt ctggtcccgggcatccgttacggcgtggaggtggcagccagtaccggagctggacccgga gtgaagagtgagctcacccacttccagctggactcctcagggaagatgactcagtccgta gtggacccagacgacacgctctctcagcagatctcagacgtggtaaagcagccagccttc atcgccgggatcggcgcggcatgttggatcatcctcatggtgttcagcatctggctgtac cgccatcgcaagaaaaggagcggtctgagcacgagctacgccggcattcgcaaagtgcct tcattcaccttcacgcctactgtttcctatcaaagaggaggagaagctgtgagcagcgct ggcaggcctggattgttgaacattagcgactcggctacccagccctggctagcggacaca tggcccaacaactgctccaatcagaacgactgcagcatcaactgctgcaccgcgggcaac ggcaacagtgacagcaacctggccacctacagccgccctgccgactgcatcgctaactac agtcagatggacagcaaacccaccaacctcctagtgccggactcgtccctctacggagac gttgacctctccaacaagatcaacgagatgaaaacgttcaacagccccaacctgaaggat gggcgattggttgggcctgcgggccagcccacgccttacgccaccacccagctcattcag tccagcctgggtaccaaccacgtgggcagcgcggacctcaacgagaaacagaactggaag ggcagccaggggacacctcagaaacaacaggaagtgacctcacagctgcagtacagcatc atggagcagaacaagctgaacaaggcctcagaccactacagaagcggagaccccggcatg ccagccaccatcccgtataaccaagcgcctgatcccaatcccaacgccggcacgtacagc agctccgaccgcggcagcagcacatccgggagtcaggggcagaaaaaaggagggcgaacc acgaaggtgcccaagcagagcgcgatgaactgggctgacctgctgcctcctccacccatc agcccaccgccatgtcaggactacggcatctcaatggatgacagctacgaggccgagctg aagtgcccagtccctccgtctcgcatgtacttacagcctgatgagttagaggaggaggaa gcagatatggaacgaggcccgactcctccggttcgaggcacggcctcatctcctgccgct gtatcctacagccaccagtccactgccaccctcacgccatccccacacgaagagatgcag cccatgctcatggagaacccagagaacctacatgagcgcagacgacagctagtcagccct cctccgcccccacggcccgtctccccgtctcacacatacggctacatctcgggccccctg ggtctggacacggacggcctggaggacgaggaagaaggagacgatacagacgcggaggtg ccgttggtccaccagcgataccttcacgcgctcgtccccggaaatccgcatggcgtgcat ccgaggctgacgctgcgtgggctggatcagacgccggcatccagcacgtgcgagctggac agctccgtcactggctccatgatcaacggttggggctctgcgtctgaagaggacagcggg tcgtcgggacgctccagtgtcatcagctcgtctgacggttccttctttactgatgctgac tttgcacaggctgtggctgtcgccgccgagtacgccggcctccgggttgcgaagcattct gggaaagggccgccacactatactgggccaggagcacggaaataccaaaacctgccttca ggccaccgtccagcaagtcccttttctacagacagtaatatgagcgcagctgtggtgcag aaaagacctccaaagaaacagaaacagcaagctgctggactctaccagcgaagagaggct tacacagacgaccttcctccaccacccatcccacctccagccatgctcaagtccccaact cacccatccaaggccgcggcggagacaggaaggaggtccagctcagccgagagcagggac aagagagacaagaagcccagagatgcctcggacacaagaaccagctcgtcagagcgtaga gatgctcaagaaagacagcgggctcagagagccgggaaatccagcaaaccagagccaagc gcaggacgccagcaccaagaggacattgtgccctacagtcgaccctctttcccggccgtc cacagtccccggggtgagagagagccaagctcctccagctccatgtcatcgcgaggttct ggaggccggaggaaaggtgaaggagtcgctgggagccgcaggaatcctgcagaaattagc ctcaataccgtcggagccttccatccaggagaagagcaactggagatggcagagagctga

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