Ictalurus punctatus (channel catfish): 108277746
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Entry
108277746 CDS
T04658
Name
(RefSeq) amyloid protein-binding protein 2
KO
K25806
amyloid protein-binding protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108277746
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
108277746
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
TPR_NPHP3
TPR_7
TPR_1
TPR_8
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
108277746
NCBI-ProteinID:
XP_017346128
Ensembl:
ENSIPUG00000006419
UniProt:
A0A2D0STW2
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All DBs
Position
17:complement(10362178..10376606)
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AA seq
588 aa
AA seq
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MAAVELEWIPETLYNTAISAVVDNYTRSRRDIRSLPENIQFDVYYKLYQQGRLCQLGGEF
CELEVFAKVLRASDKRHLLHHCFQALMDHGVKVASILANSFSRRCSYIAESDAHVKEKAI
QFGFVLGGFLSDAGWYGDAEKVFLSCLQLCMLHDEILHWYRALECCVRLLHVRNGNCKYH
LGEETFKLAQSYMDKLAKHGHHANKAALYGELCALLFAKSHYDEAYRWCIEAMKEITVGL
PVKVVVDVLRQASKACVVKREFRKAEQLIKHAVFLAREHFGHKHPKYSDTLLDYGFYLLN
VDNICQSVAIYQTALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSSGKFDNALFHAERA
IDIITHILPEDHLLLASSKRVKALILEEIAIDCHNKETEERLLQEAHDLHLSSLQLAKKA
FGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASL
YNYDMNQYDDAERLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSVGNYEKLFEYHNIL
SNWNRLRDRQFAVADALEDVNTSPQTTDEVVQSFLLSNSHAVGRSCMG
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgtggagctggagtggatccctgagaccctgtacaacaccgctatatcagcc
gtagtggataattacactcggtcgcgacgggacatacgctcacttcctgaaaatatccag
tttgacgtctactacaagctttaccagcaaggccggctttgccagctgggaggggagttc
tgtgagcttgaggtctttgccaaagtcctccgagcctctgacaaaaggcacctcctacac
cactgtttccaggcactaatggaccacggcgtgaaagtggcttcaatcctggccaactcc
ttcagccgtagatgctcatacattgccgagtcagacgctcacgttaaagagaaagccatt
caatttggcttcgttttaggtggctttctgtcagacgctggttggtacggggacgcagag
aaagtcttcctgtcgtgtctccagttgtgtatgttgcatgatgagattctgcactggtat
cgtgcactggagtgctgtgtgaggttgcttcacgtgcgcaatggcaactgcaaatatcac
ctgggagaggagacgttcaaactggcccagtcatacatggacaagttagccaaacatggt
caccatgccaacaaggctgccctttacggagaactgtgcgctctgctgtttgccaaaagc
cactatgatgaggcataccgctggtgtatagaggccatgaaggagatcactgttggcctg
ccagtgaaggtggtggttgatgtcctgagacaagcctctaaggcatgtgttgttaaaagg
gagttcaggaaagctgagcagctgataaagcatgcagtatttctagcacgggagcatttt
ggacacaagcacccaaagtactctgatacgctgctggattatggattttatctgctaaat
gtggataacatttgccagtctgtcgccatatatcagactgccctggatatccggcaatct
gtgtttggagggaaaaatatccatgtggccacggcacacgaggacctagcatactcctct
tatgtgcaccagtacagctctggaaaatttgacaatgcactatttcatgcagaacgggcc
atagacatcataactcacattctccctgaggatcatttactactcgcctcctccaagagg
gtgaaagcactcattctggaggaaattgccatagactgccataataaagaaacagaagag
cggcttctgcaggaggcccacgacctgcacctctcctctctccagctagcaaaaaaagcc
tttggagagtttaacgtccagacagcgaaacattacggcaacctgggccgtctctaccag
tctatgcgcaagttcaaggaggccgaggagatgcacataaaggccatccagatcaaagag
cagttactgggacaggaagactatgaggtggctctgtctgtgggacacctggcttccctt
tacaactacgacatgaaccagtacgatgacgccgaacgcctctacctccgctctatcgcc
attggtaagaagctgtttggagagggctacagtggactggagtatgattacagaggcttg
atcaagctttacaactctgtggggaattacgagaaattgttcgagtaccacaacatcctc
tctaactggaaccgtttgagggacaggcagtttgcagtggccgacgccctagaggacgtc
aacaccagcccccagaccacagacgaagtggtgcagtccttcctgctgtcaaacagccac
gctgtgggacgttcctgtatgggttaa
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