Ictalurus punctatus (channel catfish): 108277755
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Entry
108277755 CDS
T04658
Name
(RefSeq) platelet-derived growth factor D
KO
K05450
platelet derived growth factor C/D
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
ipu04510
Focal adhesion
ipu04540
Gap junction
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108277755
04020 Calcium signaling pathway
108277755
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108277755
04540 Gap junction
108277755
09142 Cell motility
04810 Regulation of actin cytoskeleton
108277755
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108277755
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Growth factors (RTK binding)
108277755
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
108277755
NCBI-ProteinID:
XP_017346140
UniProt:
A0A2D0SUZ9
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All DBs
Position
17:3264671..3279389
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AA seq
362 aa
AA seq
DB search
MRSAAVIWRVARLLALALVCLPLVGARGAQVRADKSPRAANTRREDMFCREEVVMVMAGG
QIQSPRYPNAYPRNLLLSWKLLAPPFTRVLLEFDGRFGLEEPENNMCRHDFVEVDDISES
STITWGPWCGRKAPSPIRSQNNMLRITFKSDDFFVAKPGFKLCYSLLVDAPLSYLNNLEA
VTIVSDGVSVSNAPVSADVLDDIIAGFSTVEEVLKHLNPHTWRQDLNSIYTNTHQYIPRS
YHANHANKLDLDRLHEDVRLYSCTPRNFSINLREELKATNAVFFPRCILVKRCGGNCACG
TEHWNSCTCSPAKTVSKLHEVLKFSPGPNFYKKKTRARWVLEEINLQHDERCECACQSRP
PR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcggcggcggtgatctggcgggtcgcgcgcctgctcgcgctcgcgctcgtgtgt
ttgccgctggtcggtgcgcgcggtgctcaggtgcgagccgacaaatcgccgcgcgcggca
aacacgcgccgagaagatatgttctgccgtgaggaggtcgtcatggtgatggcaggcggc
cagatccagagcccacggtacccaaacgcctacccgcgcaacctcctgctgtcatggaaa
ctgctggccccacccttcacacgtgttttgctggagtttgatgggaggtttggtttagag
gagcctgagaacaacatgtgcagacatgattttgtggaggttgatgatatttcggaaagc
agcaccatcacttggggtccctggtgtggacggaaagccccgagtcccatcaggtcccaa
aacaacatgctcagaatcacgttcaaatctgatgacttctttgtggccaagccgggattc
aaactctgctactccctgctggttgatgctcctctgtcttatttgaataacttggaggcc
gtcacaattgtgtcggatggtgtgtctgtctcaaatgctccagtatcagctgatgttttg
gatgatatcattgcggggttcagtacagtcgaggaggttcttaaacacctgaacccacac
acctggagacaggacctgaactccatctacacaaatacacaccagtacataccacggagc
taccatgccaaccatgcaaacaaacttgatctggatcgtctccatgaggacgtgaggctg
tacagctgcacgccacgtaatttctccataaacctgcgggaggaactgaaagccaccaat
gctgtgtttttcccacgatgcatcttggtgaagcgctgtggagggaactgtgcctgtggg
actgaacattggaactcctgcacctgtagccctgccaaaacagtcagcaagctccatgag
gtgctgaagttctccccaggaccgaatttctacaaaaagaaaaccagagcacgctgggtt
ctcgaggaaatcaacctgcagcatgacgagcggtgcgagtgcgcgtgtcaatcacgacca
cctcgatga
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