Ictalurus punctatus (channel catfish): 108277778
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Entry
108277778 CDS
T04658
Name
(RefSeq) gem-associated protein 4
KO
K13132
gem associated protein 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108277778
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
108277778
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NCBI-GeneID:
108277778
NCBI-ProteinID:
XP_017346169
Ensembl:
ENSIPUG00000006029
UniProt:
W5U6D0
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Position
17:complement(10729137..10733776)
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AA seq
1063 aa
AA seq
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MMDRESWLNCEKTAVLQGGFLLANQLCQPESLSTLRKEDWEHIGRPIVQAVTEVCGQLCA
TNHEKLHWRKRILCILWSKILEIEKGEDIDIRWRENPLFAIQNTLPDINHTVLFELIKSM
DFFSIYVELLQCFDSVQQCTELDRLVKHVTRDSTEADAKFLLEVWWELLKGRKETEDNLD
QIFSSQCVCFTETLSDCSPQASKRFKPDPDLDVSTTCIMSILYQGLKDIKDTITSSEICY
LALSNCLDMLYTFYLLNQATDLPAEVKLQNIACSVSLRKRNNPLGGVDLIQAIHESYRDL
AATLIPAQSKPRGITLIQAMDTALEVIHVWEKRGLLRMPTNDPSALAIRLKDSLGRVLKS
LEVQSGNLGENGQTVNSLKRTLEDLLASSSFNVPESPSSEIASIAITIIDGNLKGFEDLP
KLFASKLCQTFSDAEWLSCLERNKGAFQEKDLVMALVSSLISKCQSDADVKHCKKFKDIV
VEIFSQLPLPDKNAILSEILTLSKKGLHGCLPSSVTTGYDEELNLAFNCIIQGEAKSSLS
SAINAVALMAFQNPEATMHRCCHMAVVNLGAHTLLAQILQQLSGLMSTSKNPSGTRNKEY
NLLCSCLQDTMWNKLSSCKEEDQFLCFLSALMESKITGQRGEELSFLLPEDIVHAFVLPY
LSFSCPQPCRLEVCLRLFQSALAHISTDDDMQWIMNCSPFALLYCLAQLLNNCSKCWDQQ
LEGDIGLSLESKELLISILTTVGKAVGKEVALAPSTWSRALSWFYAKVEELDWTVRIHLK
VVWGEHFKYEVPSSLMAVSDLSEQEWSGLVLPHYGQGTGLLAWIECCCLSDNIQEIMLDS
LSLNLLNPEEVTMFSKGLLVAVSQVLPWCTVGEWQRLLKVLHELLQSDKLHVPYSLEYVD
FLPLLDLRFFAHELQASVFLLRTLQLLCGSSCAGWLPPKGWAHVGRLCATAMRGIIDSVK
NKVPLQSTTTSPTSGNLSQEVLFVLTQLFCHVLHIQVMMPGQPEPLFLCALDILSHYESL
LAAYPKSSTAVQVANTRHFLTTISDNLQCTDMRAVLHQKIAQL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccgagagtcctggctgaactgtgagaagactgctgttttgcagggtggattt
ctgctggcaaatcagttatgccagccagagtctctatccactttgagaaaagaggactgg
gagcacattggacgccctattgttcaggctgtcactgaagtatgtggacagttgtgtgca
accaaccatgagaagcttcactggagaaagaggattctgtgtattctatggagcaaaatt
ttggaaattgagaaaggggaagatatcgatatcagatggagggaaaacccattatttgcc
attcagaataccctccctgatattaatcatacagtactgtttgaactgatcaaatccatg
gacttcttcagcatctatgttgagttgctgcagtgctttgactcagtccaacagtgcaca
gagctggatagattagtcaaacatgttacaagggacagcacagaagctgatgcgaaattc
ttgctggaggtgtggtgggagctgttgaaaggaagaaaagaaacagaggacaacctagac
caaatctttagttcccagtgtgtatgctttacagagaccctctctgactgctcaccacaa
gcttcaaaacgatttaaaccagacccagatttggatgtgtccaccacgtgcataatgtcc
atcctataccaaggactgaaggacataaaggacactataacttcatctgagatatgttat
ttggctctctccaactgcctagacatgctgtacaccttctatctgttgaaccaggcaaca
gaccttccagctgaagtcaaactccaaaacattgcctgctcagtgagcctgcgaaagaga
aataatcctttgggaggggttgatcttattcaggccatacacgagtcttacagagatctt
gctgctacactcattcctgctcagagcaagccacgtggaattacactgatccaagccatg
gacacagcacttgaagtaatacatgtatgggaaaaaagagggttactgaggatgcccact
aatgacccgagtgctttagcaatccgtctcaaggatagtctgggcagagttcttaagtct
ttggaagtccagtctggaaaccttggggaaaatggtcagacagtaaatagtttgaaaaga
actttggaagatttgcttgcatcctcgtcatttaatgtgcctgaaagtccatcaagtgaa
atagcaagtattgccataacgatcattgatggcaatctgaagggttttgaggatcttcct
aaactttttgcctccaaattgtgccagactttcagtgatgcagagtggctaagctgcctt
gagagaaacaaaggtgcatttcaggaaaaagaccttgtcatggccttagtctcttctctt
atatccaaatgccaaagtgatgctgatgtaaaacactgcaaaaagttcaaggatattgtt
gtggaaatattttcccagctgcctttaccagacaagaatgcaattctttcagaaattctt
accttatcaaagaaaggtttgcatggctgccttcccagctctgtaacaacaggctatgat
gaggaactcaatctggcttttaattgcatcattcagggtgaagcaaaaagcagcctgagc
tcagccatcaatgctgtggctctcatggccttccagaaccctgaggctaccatgcatcgg
tgctgccacatggctgtggtgaacctcggcgctcatactctccttgctcagattctccag
cagctctctggacttatgagcacatcaaagaacccgagtgggacaagaaataaagaatac
aatttgttatgcagctgtctgcaagatactatgtggaacaaactctcttcatgtaaagag
gaagaccagtttctttgtttcctgtcagcattaatggagtccaagattactggccaaagg
ggagaagaactaagcttcctcttaccagaagacattgtacatgcgtttgtcttgccttat
ctctccttttcatgcccccaaccctgcagacttgaagtgtgcctacgacttttccaatca
gctttggcccatatatccacagatgatgatatgcaatggataatgaactgctctccattt
gctctcctatactgtcttgctcagcttttgaataattgcagtaagtgctgggaccaacaa
ttagagggtgatattggtttgtctcttgaatccaaagaactgttgatctccattctgacc
acagtgggcaaggcagttggcaaggaagtggctctagctcctagtacttggtccagagca
ctttcttggttttatgcgaaagtggaagaactagactggactgtccgcattcacctaaaa
gtagtctggggagagcatttcaaatatgaggtgccaagttctctcatggctgtatctgac
ctttctgagcaggaatggtcaggattggtgttgcctcactatggtcaaggcactggcctg
ttggcctggattgaatgttgttgtctctcagataacattcaggaaataatgctggactcc
ctatctctaaacttgctcaacccagaggaagtaaccatgttcagtaaaggcctgctggtg
gcagtatctcaggttcttccctggtgcacagttggcgaatggcagcgactactgaaagtg
ttgcatgaattgctccagtcagataagcttcatgtaccatactcactggaatatgtggac
ttcctcccattacttgaccttcgtttttttgctcatgaattacaagcgtccgtgttcctg
ctgcgtacgcttcagctgctctgtggctccagctgtgcagggtggctgcctccaaaaggc
tgggcacatgtaggccggctctgtgctacagccatgaggggcatcatagactctgtgaag
aacaaagtgccactccaatccaccaccacctctcctacaagtggaaatctcagtcaggag
gtcctgtttgtgctgactcagctgttctgccatgtgcttcacatacaggtgatgatgcct
ggacagccagagcctttgtttctgtgtgcactggacattctgtcccactatgaatctcta
ctggctgcataccccaagagcagcactgctgtacaggtagctaatacacgccacttcctt
accaccatttcagacaatctgcagtgcacagacatgagagctgtcctgcaccagaagatt
gctcagctatga
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