Ictalurus punctatus (channel catfish): 108277794
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Entry
108277794 CDS
T04658
Symbol
scn4ba
Name
(RefSeq) sodium channel, voltage-gated, type IV, beta a isoform X1
KO
K04848
voltage-gated sodium channel type IV beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
108277794 (scn4ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108277794 (scn4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108277794 (scn4ba)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108277794 (scn4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
ig
Ig_3
Ig_2
I-set
V-set_CD47
Golvesin_C
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
108277794
NCBI-ProteinID:
XP_017346207
Ensembl:
ENSIPUG00000018195
UniProt:
A0A2D0SU51
W5UAU4
LinkDB
All DBs
Position
17:4541970..4564382
Genome browser
AA seq
244 aa
AA seq
DB search
MDKRVHGKVDMEVWRTRGSILHRSTRSGDGIHASIVITLLIGVWCAQALEVSVGKAGFVE
VMNGSSVLLPCSYSSCIGIKNLYFNWKYNNDNGTMDMLCEGVIPAEGLEPHVTIAHERVM
FVGSSKDSNISVLLWNVTFEDKGEYTCFARNPKEKNRNHSAVFNLIVVDQLKEVDNTLTL
IIVSVIGGVIGLIIIVMVIKAVVIHFLNKNQEKNKECLVSSSGNDNTENGLSGSKADNKA
SPKA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacgtgtgcatggaaaagtggacatggaggtgtggaggactagaggatcaatc
ctgcacagaagcacaagatctggtgatggcatccatgctagcatagtcatcacccttctg
attggggtatggtgtgcacaggcattggaagtgtcagtggggaaggctggctttgttgag
gtgatgaatggcagctctgtactcttaccttgtagctacagtagctgtatcggcatcaag
aacctgtacttcaactggaagtataataatgacaatgggacaatggatatgctttgtgag
ggagtcatcccagctgagggtttggagccccatgtgacgatcgcccatgagcgtgtgatg
ttcgtgggctccagtaaggacagtaacatttctgtcctgctgtggaacgtcaccttcgag
gataagggcgagtacacttgcttcgcccgcaaccccaaagagaagaaccgaaaccacagt
gccgtattcaacctcatcgtagttgaccagcttaaggaagtggacaacacgttgacgcta
atcattgtatccgtgattggaggagttattgggttgatcattatagtcatggtaataaag
gcagtggtcatccattttctcaacaagaaccaggagaaaaataaagagtgccttgtgagc
tcttcaggaaatgacaacacagaaaatggcctttcaggttccaaagcagacaacaaagca
tcaccaaaggcttaa
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integrated database retrieval system
