Ictalurus punctatus (channel catfish): 108277806
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Entry
108277806 CDS
T04658
Name
(RefSeq) McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin isoform X1
KO
K09492
McKusick-Kaufman syndrome protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ipu03110
]
108277806
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108277806
Chaperones and folding catalysts [BR:
ipu03110
]
Heat shock proteins
HSP60 / Chaperonin
108277806
Cilium and associated proteins [BR:
ipu03037
]
Primary cilia and associated proteins
BBS-CCT complex
108277806
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Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF440
Motif
Other DBs
NCBI-GeneID:
108277806
NCBI-ProteinID:
XP_017346230
Ensembl:
ENSIPUG00000020448
UniProt:
A0A2D0SV90
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Position
17:14084009..14091036
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AA seq
565 aa
AA seq
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MSRVCKKKPSVCTDEPLSNDEMCHKIAVMRHVLNSCYGPRGRLKQIHNSVGGHVQTTSTA
DVLLKAMIFSEPLLKLITAAILDHTARFSDCGLFTGVFCLGLIENGKRSGLGSAVASRVY
KYLLEVCNGYLSAGGCDCKVHVDFSSIRSLIALAHTAVTSKPACMLNHDESQHIASLIVH
AFLQSVPSGSANTFGRTLVVTLEGQPVSDSAVFPGLLVEVPILQSVDLKNHNPGPDKIVL
FRASLSGDCSEIGEATLEIQVGINPETAILEQLMKLGERVVQDGVGVFACQKVIHPVLQQ
YLKERGLVVIERLGLALLEPLAQMTGALIMASICSPVPAKAYGQIGGLHLHRIGSKELLQ
LLPSGEAAVNTVVLCHRNETMLEELKVTCQRAEHVLRLTLKEPYALIGGGCTETVLSAYI
KYMSESKASEAASALKCSRAEFLLATEAFCCSLQSVALSLDHDDQHFLMDLTHAHCWVAE
EDAHSQTTTFHACSCGLVKEKADLEKIFLNIPLKRAYHSFLPARIKSDVQPELLDSFTAK
INALNVAVETADLVLSVKYIIRDVN
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtgtttgtaagaaaaagccctcagtgtgcacggatgagcctcttagtaatgat
gagatgtgccacaaaatagcagtaatgaggcatgtgctgaactcttgctatggcccacgt
ggcagattaaaacaaatccacaacagtgtcgggggacatgttcagaccacatccaccgca
gatgtactgctcaaagccatgattttctccgagccgctgctcaaactgatcactgcagcc
atcttggatcacaccgcgagattcagcgactgcgggttgtttacaggagtcttttgcctt
ggcctcattgaaaatggcaagcggtcgggactcgggtctgctgtagcaagtcgggtgtat
aaatacttgttagaagtatgcaatgggtatctcagcgcaggcggctgtgactgtaaggtt
cacgtagacttcagcagcattcgatcactcatcgctttagctcatactgcagtcactagc
aaaccagcctgcatgctcaaccatgatgaatcacaacatatcgcctctctgatcgtgcat
gccttccttcagtctgttccttcgggttcagcaaacacctttggaagaacgctggtggtg
accttagaaggacagccagtgagcgattctgctgttttccctggattactagtcgaagtg
cccattctgcagtcggtggatctgaagaaccataatccaggtcccgataagatagtgtta
tttcgcgcatctctgtcaggtgactgctctgaaattggagaagcaactttagagatccaa
gtgggaataaatccagagacggccatcttggagcagttgatgaaacttggagagcgagtg
gttcaggacggtgttggagtgtttgcatgtcagaaggtgattcaccctgtgctgcagcag
tacttgaaggaacgtggactggtggtcatcgagagactcggacttgccctactggagcca
cttgcccaaatgacaggcgctctgattatggcatctatctgctccccagtcccagccaaa
gcatatggacagatcgggggactccatctgcaccgaattggatctaaagagcttctccag
ctccttccttctggagaggcagccgttaacacagtggtgctctgtcacaggaatgaaacg
atgttagaggagctcaaggtgacatgtcagagagcagagcatgtactgcgactgactctt
aaggagccatatgcactaattggaggaggctgtacagagacagtgctgtctgcttacata
aaatacatgagtgagtctaaggccagtgaagcagcctcggctctaaagtgctcacgtgcg
gagtttctcctcgctacagaggcgttctgctgctctctgcagtctgtggctctttcttta
gaccatgatgaccagcacttcctcatggacttgactcatgctcattgctgggttgcagaa
gaggatgcacactcacaaaccacaacctttcacgcctgcagctgtggtctggtaaaggaa
aaggcagatctggagaagatctttcttaatattcctctaaagagagcatatcactccttc
ctgccagcacgaatcaaatctgatgttcagccagaactgttggactcgttcactgccaaa
atcaatgccttgaatgttgctgtagagacagcagatcttgtgctcagtgtaaaatatatt
attagggatgtgaattaa
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