Ictalurus punctatus (channel catfish): 108277834 Help Entry 108277834         CDS       T04658                                  Name (RefSeq) protein Atg16l2 isoform X1   KO K20868   autophagy-related protein 16-2 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:ipu00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     108277834  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ipu04131]     108277834    03029 Mitochondrial biogenesis [BR:ipu03029]     108277834 Membrane trafficking [BR:ipu04131]  Autophagy   Autophagosome formation proteins    Atg12 conjugation proteins     108277834  Others   Specific organelles associated proteins    Auto phagosome     108277834 Mitochondrial biogenesis [BR:ipu03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     108277834 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd ATG16 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_IFT122_1st Ge1_WD40 Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Cytochrom_D1 Motif Other DBs NCBI-GeneID:  108277834 NCBI-ProteinID:  XP_017346286 Ensembl:  ENSIPUG00000020074 UniProt:  A0A2D0SUT7 LinkDB All DBs Position 17:13608813..13637850 Genome browser AA seq 609 aa AA seqDB search MATTECTKPGRQFTKTSPDPQHSEPWKRHIIRQLKYRDKAQKIVFQDVIRSYVKLLERCA QSAVITQGLISSPRLFPSSDDLSSLKTATGELAYKVLELQQEIKIKDTFLERQHTRLHDT QNSLMVVELEKGRLNSDVKKMTDNNLLLKSKYDTLRERYQHLDEVYRNEKLHGSDILEDM IHFKEQAAARMNHRNERRLRARQAGLHKELEVAASESLNTEKVSQSVSLPSSPLLHRNES GEVLERSPLRPFRSASVTSPRILGSIRGLFEGAVQDIMQIKVKSLRKKRRGNSVSSLEED RYTPLVCLVARVPTKVIHAVDAHELGINAVRFSPQSNLLATGGTDRVIKLWDISSGMLHY RGTLDGSNEGITSIEFDSMGSRILAGSYDNSALIWRLDDSVPKFTLTGHSRKVTAARFRS NLRQVVTGSGDRTVKIWDLQRAACIQTIEVLSYCSDIVCSDYYIISGHFDRKIRFWDSRA ASCTQEVPLQGRVTSLDISPNHRELLSCSRDESLQLVDLRMSKPRMAFRAEGFKCGSDST KAIFSPDGSYLAAGSADGGVYIWNISTGNLETCLLDMHRTSVNAVAWSMSGEYMVSVDKS RCAILWSDI NT seq 1830 nt NT seq  +upstreamnt  +downstreamnt atggccactacggagtgcacgaagcctgggagacagttcaccaagacgagcccggaccca cagcactccgagccatggaaacggcacatcatccggcagctgaaatatcgcgataaggcg cagaagatcgtcttccaagatgtgatacgatcatatgtcaagctgcttgaacgctgcgcg caaagtgcagtaatcacccaaggcctcatctcctcgccaagactgtttccctcatctgac gatttgtcatcgctgaagacagccacgggtgagcttgcttacaaagtactggagctgcaa caagagataaaaatcaaggacacttttcttgaaaggcaacataccaggttgcatgacact cagaacagccttatggttgtggaattagagaaaggcagactgaattctgatgtgaagaag atgactgataacaacttactcctcaagagtaagtatgacactctgcgtgagcgctatcag cacttggatgaagtgtacaggaatgagaaactccatggctcagatatcctggaggacatg attcacttcaaagaacaggcagctgctcggatgaaccaccgcaacgagaggcgactgaga gcaaggcaagctggtcttcataaggagcttgaggtggctgccagtgaaagtttgaacact gaaaaagtatcccaaagtgtatcattaccatcatcaccattactacacaggaatgaaagt ggagaggttttggaacgtagccctttacgacctttcaggtcagcttcagttacttctcct cggattcttggctcaataagaggtttatttgagggtgcagtgcaagacatcatgcagata aaggtcaagagcttaagaaagaagaggcgaggtaattcagttagcagtttggaagaggat cgctatactcctttagtttgcttagtagctagagtcccaaccaaagtcattcatgcagtg gatgctcatgagcttggaatcaatgcggtgagattcagcccgcagtcaaatctgctggcc actggaggcacagatagggtgatcaaactgtgggacatcagttcaggcatgctgcactac agagggacactagatgggagtaatgagggcatcaccagcattgagtttgactctatgggc agccgaattttagccggatcatacgacaactcagctctaatttggcggttggatgactct gttccaaagtttacgctgacaggccattctcgcaaagtgacagcagctaggtttaggagt aacctaaggcaggtggtcactgggagtggagataggactgtaaaaatctgggacctgcaa cgtgctgcctgtatacagaccattgaggtattgtcctactgtagtgacatagtgtgctca gactattacataatcagtggccattttgaccgaaaaatacgcttctgggacagcagggca gcgagctgcactcaggaagttcccctacaggggagggtgacatcacttgacatctcaccc aaccacagagagttactaagttgctcaagagatgagagcctgcagctggtggatctgaga atgagcaaacccagaatggccttccgggcagaaggtttcaaatgtggaagtgacagcacc aaggctatcttcagtccagatggaagttacctggcagctggctctgcagatggtggtgtg tacatctggaacattagcacaggcaacctggaaacgtgcctactagacatgcatagaacc tcagttaatgcagtggcttggtcaatgtcaggggagtatatggtgagtgttgataagagc cgatgtgccattctgtggagtgacatctga

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