KEGG   Ictalurus punctatus (channel catfish): 108277836
Entry
108277836         CDS       T04658                                 
Symbol
cul5a
Name
(RefSeq) cullin-5a isoform X1
  KO
K10612  cullin 5
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108277836 (cul5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108277836 (cul5a)
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108277836 (cul5a)
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     108277836 (cul5a)
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108277836 (cul5a)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 108277836
NCBI-ProteinID: XP_017346293
Ensembl: ENSIPUG00000015796
UniProt: A0A9F7RJ99 A0A2D0SUD6
LinkDB
Position
17:complement(5960035..5984880)
AA seq 854 aa
MSSVQPERACSVSPTGPFSVDMVATVETLSLASCLFTACRSSWTVDSASPRVSWRFWSCF
LKISAMSFLSKASSTSLSAVKSNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSD
VHAVCLWDDKGPAKIHQALKEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDI
LPKPFCQLEITLMGKQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAE
RLGEAFDSQLVIGVRESYVNLCSNPDDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNG
VQNYMKYADAKLREEEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIK
RNETDKLHLMFSLMDKVPSGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLT
LFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPE
LLANYCDMLLRKTPLSKKLTSEEIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDI
SADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNKLALPADSV
NIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKN
EVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQ
VLSYEPQVSSPKDFTDSTLFFVNQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENEG
IVQLRILRTQEAIIQIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYI
KRDESDINTFIYMA
NT seq 2565 nt   +upstreamnt  +downstreamnt
atgtcatcagtgcaaccggagagagcgtgctccgtttccccaacaggacctttcagtgtt
gatatggtagccacggtagaaactttatcactagccagctgtcttttcacggcctgcagg
tcaagctggacagtagacagcgcatccccgagagtctcctggagattctggagctgcttt
ttaaaaatatcggcgatgtccttcctcagtaaagccagcagcacgagcctgagtgcggtg
aagtcaaacaaagggtccctccagtttgaggacaagtgggatctgatgcgtccgattgtc
ctgaagttacttcgccaggagtctgtaacgaagcaacagtggttcgatctgttctcagac
gttcatgcagtctgtctatgggatgacaaaggcccagcaaagattcaccaggctcttaag
gaggacattttagattttataaagcaagcccaggcgagggtgctcagtcaccaagatgac
acggccctcctcaaggcttacatcgtggagtggaggaagttcttcactcagtgtgatata
ctacctaagccattttgccagcttgagatcactctgatggggaaacaaggcagcaacaag
aagtcgaacgtcgaggacagcatcgtgcggaagctgatgttggacacttggaacgaatcc
attttttccaacatcaagaacagactgcaggatagtgcaatgaagctggtccatgccgaa
agactcggagaggctttcgactctcagctggtcatcggagtgcgcgagtcttatgtgaac
ctgtgttccaaccccgatgataagctgcagatctacagggataattttgagaaggcctac
ctggactccactgagaggttctacaggacacaggctccttcctacctgcaacaaaatgga
gtccaaaactacatgaaatatgcagacgctaaattaagggaggaggaaaaacgtgcacta
cgctatttagagacacgacgtgaatgtaactctgttcaagcacttatggaatgttgtgta
aatgcactggtgacgtcattcaaagaaacaatcttggcagaatgtccaggcatgattaaa
cgcaatgagactgacaagcttcacctgatgttctcactgatggataaagtacccagtgga
attgaacccatgcttaaggatctggaggaacacatcatcagtgctggcctggctgacatg
gttgctgctgctgagactatcacgacggactctgagaagtatgtggagcagcttctcact
ctgttcaaccgctttagtaaacttgtgaaggaggcgttccaggacgatcctcgattcctc
acagccagagataaagcgtacaaagcggttgtgaatgatgccacaatatttaagttggag
ctacctttgaaacagaagggagtgggcctcaaaacgcaacccgagtccaagtgtccagag
ctgctagccaactactgtgacatgctgctgaggaagacaccactcagtaagaagctcacc
tctgaggagatcgagctgaagttaaaagaagtgttgctggtgctaaaatatgtccagaat
aaggatgtgtttatgaggtaccataaagcccacctgaccaggaggctgattctggacatc
tctgctgacagcgagattgaggagaacatggtcgaatggctcagggaagttggtatgccg
gccgattatgtcaacaagctagctagaatgttccaggacatcaaagtctcagaggatcta
aaccaggtcttcaaggagatgcataaacacaacaagcttgctttaccagctgactccgta
aatataaagatcctgaatgctggagcatggtcgcgcagctcggagaaggtctttgtttca
cttcccactgagctggaggacctcattcctgaagttgaagacttttacaaaaagaatcac
agtggcagaaagctgcactggcaccacctcatgtccaatggcattatcacatttaagaat
gaagtgggtcaatatgacttggaggtcacaaccttccagctggctgttctttttgcctgg
aaccaaagacctagagagaagatcagctttgagaacctgaagcttgccactgagctgcct
gatgcagagctgagacgcacactctggtctctcgttgccttcccaaaactcaaacggcag
gtgctttcatatgaacctcaagtgagctctcccaaagacttcacagatagtacattgttc
ttcgttaaccaggaattctccttgataaaaaactccaaggtgcagaagagggggaagatt
aacctgattggccgcttacagttgactacggagcgaatgagagaggaagagaatgaaggc
attgttcaactaagaatattaagaacacaggaggccattattcaaattatgaagatgcga
aagaagatcactaatgcccagctgcagaccgagctggtggagatcctgaaaaacatgttc
cttccccaaaagaagatgatcaaggagcagatcgagtggctgattgagcacaagtacatc
aagcgtgatgagtcggacattaacaccttcatctacatggcatag

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