Ictalurus punctatus (channel catfish): 108277854
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Entry
108277854 CDS
T04658
Symbol
zmp:0000000529
Name
(RefSeq) WD repeat-containing protein 20 isoform X3
KO
K24731
dystrophia myotonica WD repeat-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108277854 (zmp:0000000529)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108277854 (zmp:0000000529)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40_Prp19
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
PD40
WDR55
Beta-prop_EML
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
108277854
NCBI-ProteinID:
XP_017346327
Ensembl:
ENSIPUG00000019208
UniProt:
A0A2D0SUH1
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All DBs
Position
17:2177081..2190668
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AA seq
631 aa
AA seq
DB search
MAGDGGALKDINEIKSQFRTREGFYKLFTLSDSQQRAGLARGPGAGGAAAGATSIPGGGG
GVVPGPGGSSPASAGFLPPVRVSMVKLQPEDPSEESERVCFNVGRELYFYTYTNIKKAVD
LSKPIDKRIYKGTQPTCHDFNQYSATADSVALIVGFSAGQVQYLDPIKKETSKLFNEERL
IDKTKVTCLKWLPKSENLFLASHASGHLYLYNVEHPCGTTAPQYTLLRQGEGFAVYACKT
KTPRNPLLRWAVGEGGLNEFAFSPDGVHIACVGQDGCLRVFHFDSMELHGVMKSYFGGLL
CVSWSPDGKYLATGGEDDLVTVWSFAESRVVARGHGHKSWVNVVAFDPFTTSIEEEEPME
LSGSEEDLHQGQGALNFGRVRTSSTLSRLSRHSSKGGGPSVSYRFGSVGQDTQFCLWDLT
DDVLYPRLPLSRALTNTFGSNVPPSISVGLNSTSGSGGVEGHHHPSNTHQTASLPLPLPR
SLSRSNSLPHPAVANASKSQGGTESGGTGGSGGGSSAPFSIGRFATLSLQERKSDKSATG
GEKEHKRYHSLGNISKSNDKINVAPRSNRLDASKVLGTTLCPRMNEVPLLEPLVCKKIAH
ERLTVLVFMDDCIITACQEGLICTWARPGKM
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgatggaggcgctctgaaggatattaacgagatcaagtcgcagttccgcacc
agggagggtttctacaagctgttcacgctctcggactcgcagcagcgggccgggttagcg
cgcggtcccggcgctggaggtgccgcagccggtgccacctcgataccggggggcggcggc
ggtgtggtaccgggacccggcggctcctctccggcttcggcgggcttcctgcctccggtg
cgggtctccatggtgaagcttcagccggaagacccgagcgaggagtccgagcgtgtgtgc
ttcaacgtcggccgcgagctctatttctacacgtacaccaatattaaaaaggcggtggat
cttagtaagcctatagacaagcgtatatataaagggacgcagcccacgtgtcatgacttt
aatcagtattcagcgactgcggacagcgtggctctcatcgtcggcttctcagcaggccag
gtgcagtacctggaccccatcaaaaaagagaccagcaagctcttcaatgaagagagatta
atagacaaaactaaagtgacctgtctcaaatggctccctaaatctgagaacttattcctg
gcctcccatgctagtggtcacctctacctctataatgtggaacacccatgtggcacaaca
gcgccgcagtatactctgcttcgacagggtgagggatttgctgtttacgcttgcaaaacc
aaaacgcctcgtaatccacttctgagatgggcggtgggggaaggcgggctgaacgaattt
gcgttttcgcctgacggtgtgcacatagcttgtgttggccaagatggctgcctacgtgtc
tttcattttgattcaatggagctgcacggtgtcatgaagagctactttggtggcttgctc
tgtgtttcttggagtccagatgggaaatatttggccactggtggagaagacgacttggtc
accgtatggtcgtttgcagagagtcgtgtagtggcgcgaggtcatggacacaagtcctgg
gtaaacgtggtggcttttgacccctttaccaccagcatagaagaagaagaaccaatggag
cttagcggtagtgaggaggatctccaccagggccaaggggcactaaattttggtcgtgtg
cgaaccagcagcactttgtcccgtctctctcgacacagctctaaaggcggcgggccatcc
gtttcatatcgcttcggatcggtgggacaagatacccagttttgcctctgggatctcaca
gatgatgtcctgtatcctcgacttcctctttcccgcgccctcaccaacacgttcggctcc
aacgtgccaccttccattagtgtggggttgaacagcacgagcggaagtggaggggttgaa
ggtcatcatcacccttccaacacccaccagacggcatcattgccccttcctctacctcgc
tcgctctcaagatccaattcccttccacatcctgctgttgcaaacgcttcaaagagccaa
ggggggacagaaagtggaggaacaggaggaagcggaggaggaagcagtgctccatttagc
attggacgttttgcaacactgtcgctccaagagcgcaaatcagacaagtccgccactgga
ggggaaaaggagcacaagcgctaccacagccttgggaacatcagcaagagcaatgacaag
atcaatgtagcaccacgtagcaaccgattggatgcctctaaggtgcttggaacaacgctg
tgtccacggatgaacgaagtcccattgctagaacctctcgtttgtaagaagatcgcccat
gaaaggctcacggttcttgtcttcatggacgattgcatcatcactgcatgtcaagaggga
ctcatctgcacctgggcacggccaggcaaaatgtga
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