Ictalurus punctatus (channel catfish): 108277888
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Entry
108277888 CDS
T04658
Symbol
gbe1b
Name
(RefSeq) 1,4-alpha-glucan-branching enzyme isoform X1
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00500
Starch and sucrose metabolism
ipu01100
Metabolic pathways
Module
ipu_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108277888 (gbe1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108277888 (gbe1b)
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
108277888 (gbe1b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108277888 (gbe1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
Alpha-amylase
DUF5696
hDGE_amylase
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
108277888
NCBI-ProteinID:
XP_017346410
Ensembl:
ENSIPUG00000021373
UniProt:
A0A2D0SVR1
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All DBs
Position
17:complement(15450615..15589240)
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AA seq
689 aa
AA seq
DB search
MADIETQFSIPDFSTYLQMDPYLKPYEKDFKRRYGLFQKQLMLLEEAEGGFDQFTRSYKT
FGAHRLPDNSLVFKEWAPAAEALFLTGDFNGWDKFSHPYKKMDFGKWELHIPPKEDKTPA
VAHNSKLKVVLHTKEGERLYRISPWATYVTKPDLLVVYDWVYWDPPHPYVHKHPRPRKPR
SLRIYESHVGIASPEGKVASYSNFTHNVLPRIKDLGYNCIQLMAIMEHAYYASFGYQVTS
FFAASSRFGTPDELKELIDVAHSMGIMVLLDVVHSHASKNTEDGLNRFDGSDSCFFHSGE
RGDHPLWDSRLFNYSSWEVLRFLLSNLRWWMEEYRFDGFRFDGITSMLYHHHGVSSGFSG
SYSEYFGLQVDEDSLVYLMLANHILHTLYEDCITVAEDVSGMPMLCRPVQEGGCGFDYRL
AMAIPDKWIQILKEFKDEDWNIDTIVHTLTNRRYGEKCIAYAESHDQALVGDKTLAFWLM
DKDMYTNMSTLIPMNPVIDRGIQLHKMIRLLTHALGGEGYLNFMGNEFGHPEWLDFPRVG
NNESYHYARRQFNLVDTDHLRYCQLYIFDRDMNRTEDKYGWLAAPPAHVSTKHEGDKVIV
FERSNVIFIFNFHPTNSYSDYRVGAGAPGKYKIKLDSDEVQYGGHGRLDHNTEFFTEPVS
YNERPNSMQVYIPCRTAVVLANEEIDYCY
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatagaaacgcagttttctattcccgacttcagcacctatctacaaatggac
ccttacctcaaaccatatgaaaaggactttaaaaggagatatggtttatttcagaagcag
ttgatgctcctggaggaggctgaaggaggctttgatcagttcacacgcagctataagacc
ttcggagcacatcgcctgccggacaacagcctcgtctttaaagagtgggctccagctgct
gaggctctgttcctcactggagacttcaatggctgggataaattttctcacccatataaa
aagatggactttgggaaatgggagctgcacataccacctaaggaggacaaaacaccagct
gttgctcacaattccaagctaaaggtggtgcttcacacgaaagaaggagagcgactgtac
cgcatttcaccttgggcgacgtatgttaccaaacctgacttgttggttgtgtacgactgg
gtgtactgggatcctcctcatccttatgtgcataaacatcctcggccacggaagccccgc
agtttacggatctatgagtcacacgttggcatcgcgtctccagagggcaaagtggcatct
tacagcaacttcacacacaacgtactgcctcgaataaaagaccttggttataactgtatt
cagctgatggctatcatggaacatgcctattatgctagctttggataccaagtcacaagt
ttcttcgcagcatccagtcgattcggcactccggacgagctgaaggagcttatcgatgtg
gctcactctatgggcatcatggtgcttttagatgtggtccacagccacgcctccaagaac
acagaggatggcttgaaccgctttgatggctctgattcatgctttttccacagcggagaa
cggggagatcatcctctctgggacagccgactgttcaactattccagctgggaggtgctg
cgatttctcttgtccaacctgcgctggtggatggaggagtatcgttttgatggctttagg
ttcgatgggattacctccatgctctatcaccatcatggtgtcagttcaggattttcaggc
tcgtattcagagtactttgggctccaagttgacgaggactcgctagtctacctcatgcta
gccaaccatattctacacaccctgtatgaggactgcataactgtggctgaggatgtgtcc
ggtatgcccatgctatgtcgacctgtgcaggagggaggatgtggctttgactacaggttg
gccatggctattcctgacaagtggatccagatcttgaaggaattcaaggatgaagactgg
aacatcgacaccatcgtgcacactctgaccaacaggcgctatggagagaaatgcattgcg
tatgccgagagccatgaccaggctctggtaggagacaagaccctggccttctggctgatg
gataaagacatgtacaccaacatgagcaccttaattcccatgaaccccgtcattgaccgg
ggcattcaactgcataagatgatccggctcctgacacatgccctgggaggggagggctac
cttaacttcatgggtaatgaatttggtcatccggagtggctggacttcccacgtgttggg
aataatgagagctaccactatgcacgtcggcagtttaacctggtggacacagatcacctg
cgctactgccaactgtacatcttcgaccgggacatgaaccgcacagaggacaagtatggc
tggctcgctgcaccaccggcacatgtcagcacaaagcatgagggtgacaaggtgatcgtc
tttgagagatccaatgtcattttcatcttcaacttccaccccaccaacagctacagcgac
tacagagtgggagcgggagcaccgggaaaatataagatcaagctagactctgatgaggtt
cagtatggaggccatggccgactggaccacaacacggaattcttcactgagcctgtttct
tataatgagcgtccaaactctatgcaggtttacattccctgcagaacggctgttgttcta
gccaatgaagaaatcgattactgctactga
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