Ictalurus punctatus (channel catfish): 108277896
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Entry
108277896 CDS
T04658
Symbol
grik1b
Name
(RefSeq) glutamate receptor ionotropic, kainate 1
KO
K05201
glutamate receptor, ionotropic kainate 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108277896 (grik1b)
04082 Neuroactive ligand signaling
108277896 (grik1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108277896 (grik1b)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108277896 (grik1b)
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Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
108277896
NCBI-ProteinID:
XP_017346423
Ensembl:
ENSIPUG00000002663
UniProt:
A0A2D0SUR7
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Position
17:complement(2827246..2843498)
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AA seq
856 aa
AA seq
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MAKKKRLPSSLPLLLMLCVLACAQQNVLRIGGIFETLENEPVSVEELAFKFAVTSINRNR
TLMPNTTLTYDIQRINMFDSFEASRRACDQLSLGVAAVFGPSHSSSVSAVQSICNALEVP
HIQTRWKHPSLDNRDSFYVNLHPEYASISQAVLDIVHLYKWKSVTVVYEDATGLIRLQEL
IKAPSRYSIKIKIRQLPMGNRDARPLLKEMKRGKEFCVIFDCSYQTTAEVLKQLLSMGMM
TEYYHFFFTTLDMYALDLEPYRYSGVNMTGFRLLNVDDPQVASVLGKWSTERVQGPPKLD
TGLMEGIMTTEAALMYDAVFMVAAAAQRASQITVSSLQCHRHKPWRFGSRFMGTFKESQW
NGLTGQIVLNKTDGLRKDFDLDIISLKEDGMEKIGVWNSNTGLNLTDSKDKSGNVTDSMA
NRTLIVTTILENPYVMYKKSDKPLYGNDRFEGYCLDLLKELSNILGFSYEVKLVSDGKYG
AQNDKGEWNGMVRELIDHVADLAVAPLTITYVREKVIDFSKPFMTLGISILYHKPNGTNP
GVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLIN
SVWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMDSPIDS
ADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRKNTALVKNNREGIQRVLT
TDYALLMESTSIEYISQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQEEGK
LHMMKEKWWRGNGCPEEDSKEASALGVENIGGIFIVLAAGLVLSVFVAIAEFVYRSRRNL
DVEEASVGQCEWHNKY
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaagaaacgacttccttcgtcgttgccgctgctgctgatgctgtgcgtcctc
gcgtgcgcgcagcagaacgtcctgcgcatcggtggtatttttgagacactggagaatgag
ccagtcagcgttgaagagctagcctttaaattcgcagtgaccagcatcaaccgaaacagg
acattaatgcccaacacaacactcacctacgacatccagcgcatcaacatgttcgacagc
tttgaagcctcaaggagagcatgtgatcagctgtcactgggcgtggctgcagtatttggc
ccctcccacagctcctcagtcagtgcagtgcagtccatctgtaacgccctggaggttcct
cacatacagacacgttggaaacatccgtctttggacaacagggacagcttctatgtcaat
ctgcacccagagtatgcctccattagccaggccgtgctggacattgtgcacttatacaag
tggaagagtgtcaccgtagtgtatgaggatgcaacaggtctgattcgtctgcaggagctg
atcaaagctccatcccgttacagcattaagatcaagatccgccagctgcctatggggaac
agagacgctcggccgcttctcaaagaaatgaagaggggtaaagagttctgcgtcatcttc
gactgctcataccagaccacagctgaggtgttaaaacagttactctctatgggcatgatg
actgagtactatcatttcttcttcaccacgctggatatgtatgcgctggatctggagccg
taccgctacagcggcgtgaacatgacaggtttccgccttttgaatgtagacgacccgcag
gtggcatcagtgctggggaaatggtccacggagagagttcagggtccaccgaaactcgac
actggcttaatggagggcataatgacgactgaagcggccttgatgtatgatgccgtgttc
atggtggcagcagcggcgcagcgagcatcgcagatcaccgtcagctcactgcaatgccac
cgacacaaaccctggcgcttcggctcgcgcttcatgggcacatttaaagagtctcagtgg
aacggattaactggacagattgtcctgaacaagacagacggactgaggaaagactttgac
cttgatatcatcagcctgaaagaagacggcatggaaaagattggggtgtggaactctaac
acaggacttaacctgacagacagcaaagacaagtcgggtaacgttacggactccatggcc
aaccggactctgatcgtcacgacaattctggaaaacccatacgtgatgtataagaaatca
gacaagccactgtacgggaacgaccgattcgagggttactgcttagacctgctgaaggag
ctctccaacatcctgggattttcctacgaggtcaaactagtctcggatggcaaatatggt
gcccagaacgataagggggagtggaatggcatggttcgagagctcatagatcacgtggcg
gatttagctgtagctccactcaccattacctacgtcagagagaaggtgatcgatttctcc
aaacccttcatgaccctcggaatctccatcctgtaccacaaacccaacggcacaaacccg
ggtgtcttctccttcctgaacccgctctcccctgatatctggatgtacgtcctactcgct
tgcctaggtgtcagctgcgtccttttcgtcatcgccaggttcacaccttatgaatggtac
aatcctcacccctgcaatcctgactctgatgtggtggagaacaactttacactaatcaac
agcgtgtggtttggcgttggagcactaatgcagcaaggttcagagctgatgcctaaagct
ttgtctactaggattgttgggggcatctggtggtttttcacactcatcatcatctcatcc
tacacggcaaatctcgccgcgtttctcaccgtggagcgcatggactcgcccatcgactcg
gctgacgatctcgccaaacaaaccaagattgagtacggagccgtgagggacggttccacc
atgaccttcttcaagaagtcgaagatttcgacatatgagaagatgtgggccttcatgagc
agccgtaagaacacggctctggtgaaaaacaaccgcgagggaatccaacgtgtgctgacc
accgactatgcgctcctgatggagtccaccagcattgagtacatcagccagcgcaactgc
aacctcacacagattggaggcctcattgactccaagggctatggagtgggaaccccaatt
ggttccccataccgcgataaagtgacgatagcaattctgcaactgcaggaggaaggaaag
ttgcacatgatgaaggaaaagtggtggcgaggaaatggctgtccagaggaggacagtaag
gaggcaagcgctcttggcgtcgagaacatcggcggcatcttcattgtcctcgccgctggg
cttgtgctctccgtgttcgtggccattgccgagtttgtttacagatcacgcagaaatctc
gatgtggaggaggcgagtgttgggcagtgcgagtggcacaacaagtactga
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