Ictalurus punctatus (channel catfish): 108277930
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Entry
108277930 CDS
T04658
Name
(RefSeq) ARF GTPase-activating protein GIT1 isoform X1
KO
K05737
G protein-coupled receptor kinase interactor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108277930
09142 Cell motility
04810 Regulation of actin cytoskeleton
108277930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108277930
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108277930
Endosome - Golgi transport
Arf GTPase associated proteins
108277930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
ArfGap
GIT_SHD
Ank_2
Ank
Ank_4
Ank_5
Shugoshin_N
TTRAP
T7SS_ESX_EspC
Motif
Other DBs
NCBI-GeneID:
108277930
NCBI-ProteinID:
XP_017346477
Ensembl:
ENSIPUG00000019732
UniProt:
A0A2D0SUW0
LinkDB
All DBs
Position
17:13485350..13516533
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AA seq
763 aa
AA seq
DB search
MSRKVQRSEVCADCSAPDPGWSSINRGVLICDECCSVHRSLGRHISIVKHLRHSGWPPSL
LQMVQTLASNGANSIWEHSLLDPAQVQSGRRKPNPQDKVHPTKSEFIRAKYQMLAFVHKL
PCRDDDGVTSKDLSKQLHSSVRTGSLETCLRLLSLGAQANFFHPEKGTTPLHVAAKAGQV
LQAELLVVYGADPGAPDINGRTPMDYARQAGQVELAERLVECQYELTDRLAFYLCGRRPD
HKNGHYIIPQMADRARPKCPTQSLDLSELAKAAKKKLQALNNRLFEELAMDVYDEVDRRE
NDAVWLTTQNHSTLVTERSAVPFLPVNPEYSATRNQGRQKLARFNAREFATLIIDILSDA
KRRQQGKGLTSPTEPLDASQADDDQHDYDSVASDEDTDSEITAQNNTNAQRNNRAKSMDS
SDLSDGPITLQEYLEVKKALASSEAKVQQLMKVNNNLSEELRRLQKEISRMQTENVALKG
AQAGPAGALGGGNPALWPMGVRGGAGGVGSGDSSLAPPSSAPLRRDRQAFSMYEPGTAAP
KALGPALDSLSGHLQPLSSSVSVRKGASAGPTPYGGPHMSASMEMGRYMPPKLEKHGSGT
DSDYDNTQTYDTSIGVGRSSEEESRAEEDSGDAGEPDPTLPCTEDVILKTEQVTKNIQEL
LRAAQEFKHDSFVPCSEKIHSAVTEMASLFPKRPALDAVRASLKLLASSASRLQVECRKA
APSEPSASAVDYQLLTQQVIQCAYDIAKAAKQLVTITTREKKQ
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaagtccaaagaagtgaggtgtgtgcagactgcagtgcgccagatccaggt
tggagcagtataaacagaggggtgctgatctgtgatgagtgctgctctgtgcaccggagc
ctcggacgccacatctccatcgtaaagcatttgcgccacagcggctggccaccttcctta
ctacagatggtgcagacgctggccagtaatggtgctaactccatttgggagcattcactc
ctggatcctgcgcaggttcagagtggtcgcaggaaacctaacccacaagataaagtccac
cctaccaagtcagagttcattcgcgccaagtatcagatgctagcctttgtccacaaactg
ccgtgtcgtgatgatgatggggtcaccagcaaggatctcagcaagcaactacattcgagt
gtgcggacaggaagtctggagacatgtctgcggctgctgtctcttggcgctcaggccaac
ttctttcatcctgagaaaggcaccactcctctgcacgtggctgctaaagcaggtcaggtc
ctgcaggctgagctgcttgtggtgtacggggctgaccccggagcgccagacattaacgga
cgcacacccatggattatgccaggcaggcgggccaggtggagttagccgagcgtttggtg
gaatgtcagtacgagctcacagacaggctggctttctatctgtgtggccgccgtccagat
cacaagaatggacattatatcatccctcagatggcagacagagcgcgccctaagtgccca
acacagagcctggacctgtctgaactggctaaggccgccaagaagaagcttcaagcgcta
aataaccgcttgtttgaggagctggccatggatgtctatgatgaggttgaccgtagggag
aatgatgcggtgtggctaacgactcagaaccatagtacgctggttacggagaggagtgct
gtgccctttttgcctgtcaaccccgaatattcggccacacgcaaccagggccgacagaag
ttggcgcgctttaatgcacgagagtttgctacactaatcatcgacattcttagcgatgcc
aagcggcggcaacaaggcaaaggcctgacaagtcccactgagcctctagatgcgagccag
gcagacgatgaccagcacgactatgatagcgtagcttctgatgaggacacagacagtgaa
ataacggcacagaacaacaccaacgctcagcgcaacaaccgtgctaagagcatggactct
tctgatctgtcagatgggcccatcacgctgcaggaatatctggaggtgaagaaagccttg
gcctcttctgaggccaaagtccagcagctcatgaaggtcaacaacaacttgagcgaggag
ctgaggagacttcagaaagagatttcgcggatgcagacggagaacgtagctctaaagggg
gctcaggctgggcctgcgggggctctggggggtggcaacccggccctttggcctatgggg
gtaagaggaggggcaggaggagtgggcagtggggactcaagcttggctccaccctcctca
gctcctttgcggagggacaggcaggccttctcgatgtatgagcccggaacggccgccccc
aaagccctcggcccagcactggactccctgagcggccacctacagcccctcagctccagc
gtaagtgtgcgaaaaggggcgtctgcaggccccaccccttatgggggaccacacatgtca
gcctccatggagatggggcgctatatgccccctaaattagagaaacatggtagtggcact
gacagtgactacgacaacactcaaacatatgacacctccattggcgtgggccgcagcagt
gaggaggagagccgagcggaggaggatagtggagacgcgggagagccagatcctacgctg
ccatgcacagaggatgtcatcctgaagactgaacaggtcaccaagaacatccaggaactg
ctgagagcagcacaggagtttaaacatgacagttttgtgccatgctcggagaagatccac
tcagctgtgacagagatggcctctctctttcctaagagaccagctctggatgcggtgcgt
gcctccctcaagctgctggcctctagcgcctcacgtctgcaggtggagtgtcgcaaagcc
gcgccctcggagccttcggccagcgctgtcgattatcagctcctcacgcagcaggtcatc
cagtgtgcctatgatatagccaaggccgctaagcagctcgtcaccatcaccactcgcgag
aagaagcagtga
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