Ictalurus punctatus (channel catfish): 108277930
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Entry
108277930 CDS
T04658
Name
(RefSeq) ARF GTPase-activating protein GIT1 isoform X1
KO
K05737
G protein-coupled receptor kinase interactor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04517
IgSF CAM signaling
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108277930
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108277930
09142 Cell motility
04810 Regulation of actin cytoskeleton
108277930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108277930
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108277930
Endosome - Golgi transport
Arf GTPase associated proteins
108277930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
ArfGap
GIT_SHD
Ank_2
Ank
Ank_4
Ank_5
Map3k7cl
Shugoshin_N
TTRAP
T7SS_ESX_EspC
Motif
Other DBs
NCBI-GeneID:
108277930
NCBI-ProteinID:
XP_017346477
Ensembl:
ENSIPUG00000019732
UniProt:
A0A2D0SUW0
LinkDB
All DBs
Position
17:13485350..13516533
Genome browser
AA seq
763 aa
AA seq
DB search
MSRKVQRSEVCADCSAPDPGWSSINRGVLICDECCSVHRSLGRHISIVKHLRHSGWPPSL
LQMVQTLASNGANSIWEHSLLDPAQVQSGRRKPNPQDKVHPTKSEFIRAKYQMLAFVHKL
PCRDDDGVTSKDLSKQLHSSVRTGSLETCLRLLSLGAQANFFHPEKGTTPLHVAAKAGQV
LQAELLVVYGADPGAPDINGRTPMDYARQAGQVELAERLVECQYELTDRLAFYLCGRRPD
HKNGHYIIPQMADRARPKCPTQSLDLSELAKAAKKKLQALNNRLFEELAMDVYDEVDRRE
NDAVWLTTQNHSTLVTERSAVPFLPVNPEYSATRNQGRQKLARFNAREFATLIIDILSDA
KRRQQGKGLTSPTEPLDASQADDDQHDYDSVASDEDTDSEITAQNNTNAQRNNRAKSMDS
SDLSDGPITLQEYLEVKKALASSEAKVQQLMKVNNNLSEELRRLQKEISRMQTENVALKG
AQAGPAGALGGGNPALWPMGVRGGAGGVGSGDSSLAPPSSAPLRRDRQAFSMYEPGTAAP
KALGPALDSLSGHLQPLSSSVSVRKGASAGPTPYGGPHMSASMEMGRYMPPKLEKHGSGT
DSDYDNTQTYDTSIGVGRSSEEESRAEEDSGDAGEPDPTLPCTEDVILKTEQVTKNIQEL
LRAAQEFKHDSFVPCSEKIHSAVTEMASLFPKRPALDAVRASLKLLASSASRLQVECRKA
APSEPSASAVDYQLLTQQVIQCAYDIAKAAKQLVTITTREKKQ
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaagtccaaagaagtgaggtgtgtgcagactgcagtgcgccagatccaggt
tggagcagtataaacagaggggtgctgatctgtgatgagtgctgctctgtgcaccggagc
ctcggacgccacatctccatcgtaaagcatttgcgccacagcggctggccaccttcctta
ctacagatggtgcagacgctggccagtaatggtgctaactccatttgggagcattcactc
ctggatcctgcgcaggttcagagtggtcgcaggaaacctaacccacaagataaagtccac
cctaccaagtcagagttcattcgcgccaagtatcagatgctagcctttgtccacaaactg
ccgtgtcgtgatgatgatggggtcaccagcaaggatctcagcaagcaactacattcgagt
gtgcggacaggaagtctggagacatgtctgcggctgctgtctcttggcgctcaggccaac
ttctttcatcctgagaaaggcaccactcctctgcacgtggctgctaaagcaggtcaggtc
ctgcaggctgagctgcttgtggtgtacggggctgaccccggagcgccagacattaacgga
cgcacacccatggattatgccaggcaggcgggccaggtggagttagccgagcgtttggtg
gaatgtcagtacgagctcacagacaggctggctttctatctgtgtggccgccgtccagat
cacaagaatggacattatatcatccctcagatggcagacagagcgcgccctaagtgccca
acacagagcctggacctgtctgaactggctaaggccgccaagaagaagcttcaagcgcta
aataaccgcttgtttgaggagctggccatggatgtctatgatgaggttgaccgtagggag
aatgatgcggtgtggctaacgactcagaaccatagtacgctggttacggagaggagtgct
gtgccctttttgcctgtcaaccccgaatattcggccacacgcaaccagggccgacagaag
ttggcgcgctttaatgcacgagagtttgctacactaatcatcgacattcttagcgatgcc
aagcggcggcaacaaggcaaaggcctgacaagtcccactgagcctctagatgcgagccag
gcagacgatgaccagcacgactatgatagcgtagcttctgatgaggacacagacagtgaa
ataacggcacagaacaacaccaacgctcagcgcaacaaccgtgctaagagcatggactct
tctgatctgtcagatgggcccatcacgctgcaggaatatctggaggtgaagaaagccttg
gcctcttctgaggccaaagtccagcagctcatgaaggtcaacaacaacttgagcgaggag
ctgaggagacttcagaaagagatttcgcggatgcagacggagaacgtagctctaaagggg
gctcaggctgggcctgcgggggctctggggggtggcaacccggccctttggcctatgggg
gtaagaggaggggcaggaggagtgggcagtggggactcaagcttggctccaccctcctca
gctcctttgcggagggacaggcaggccttctcgatgtatgagcccggaacggccgccccc
aaagccctcggcccagcactggactccctgagcggccacctacagcccctcagctccagc
gtaagtgtgcgaaaaggggcgtctgcaggccccaccccttatgggggaccacacatgtca
gcctccatggagatggggcgctatatgccccctaaattagagaaacatggtagtggcact
gacagtgactacgacaacactcaaacatatgacacctccattggcgtgggccgcagcagt
gaggaggagagccgagcggaggaggatagtggagacgcgggagagccagatcctacgctg
ccatgcacagaggatgtcatcctgaagactgaacaggtcaccaagaacatccaggaactg
ctgagagcagcacaggagtttaaacatgacagttttgtgccatgctcggagaagatccac
tcagctgtgacagagatggcctctctctttcctaagagaccagctctggatgcggtgcgt
gcctccctcaagctgctggcctctagcgcctcacgtctgcaggtggagtgtcgcaaagcc
gcgccctcggagccttcggccagcgctgtcgattatcagctcctcacgcagcaggtcatc
cagtgtgcctatgatatagccaaggccgctaagcagctcgtcaccatcaccactcgcgag
aagaagcagtga
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