Ictalurus punctatus (channel catfish): 108277961
Help
Entry
108277961 CDS
T04658
Name
(RefSeq) limbic system-associated membrane protein isoform X2
KO
K06772
limbic system-associated membrane protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108277961
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
IgLON family
108277961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
C2-set_2
V-set_CD47
Izumo-Ig
Ig_PDGFR_d4
Sp38
Motif
Other DBs
NCBI-GeneID:
108277961
NCBI-ProteinID:
XP_017346537
Ensembl:
ENSIPUG00000019719
UniProt:
W5UAK9
LinkDB
All DBs
Position
17:1512832..1754059
Genome browser
AA seq
339 aa
AA seq
DB search
MSVRRNACCWCHLHATLFRLLCVLLPAGFPARSVDVQRATDNITVRQGDTAVIRCYVDDK
VSKVAWLNRSNIIFASEDKWSLDPRVDLVTKGQLEYSLRIQKVDVYDEGPYTCSIQTKQQ
PKTSQVYLIVQVPALIYRVSEDVTVNEGSNVTLSCLANGRPDPSITWRLLNPSAETLDVG
EYLEISGIMRTQAGRYECKANNDVATPDVKYVNVVVNYPPFIKGAKSSETQVGRPGVLQC
DATAVPKPEFEWYRDDKRLSNMQGISIHIIGSRTELIVANVTEDDYGNYTCVATNRLGIH
NASVFLYRPGTGRDINGSASVCQSLWLLLLPLLLPLLKC
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgcggaggaacgcgtgctgctggtgccacttgcacgcgaccctgttccgactg
ctgtgtgttcttctgcccgcaggctttcccgcacggagcgtggacgttcagcgcgcgacg
gacaacatcaccgtgcgccagggagacacagccgtcatcaggtgttatgtagatgacaag
gtgtccaaagtggcctggcttaaccgctccaacatcatcttcgccagcgaggacaagtgg
tcccttgacccccgtgtggacttggtgacaaagggccagcttgagtacagcctgcgcatt
cagaaggtggatgtatatgacgaggggccctatacctgctcgatccagaccaagcagcag
cccaagacctcacaggtttaccttattgtacaagttccagccttaatttacagagtgtca
gaggacgtaacggtgaacgaaggcagtaacgtcaccctaagctgtcttgctaatggtcgg
cccgatccgtccatcacctggaggctgctcaacccatcagctgagaccctggacgtgggt
gagtatttggaaatttccggcatcatgcgcactcaggccggccgctacgagtgtaaggct
aacaacgacgtcgctacacccgacgtcaagtacgtcaacgtggtcgtcaactatccacct
tttattaaaggggctaagagctcggagacacaggtgggacgtcccggagttctgcagtgt
gacgccacagcagtgcccaaaccagagttcgagtggtaccgagacgacaagaggctgtcg
aacatgcaggggattagtatccacatcatcggctctcgcactgagctcattgtggccaac
gtcacagaggacgattacggaaactacacctgcgtggccaccaaccggctgggcatacac
aatgctagtgtgtttctctacagacctggaaccgggcgggacatcaatggctctgcctct
gtgtgtcagtcattgtggcttctccttctgcccctcctcctgcctctactcaagtgttaa
DBGET
integrated database retrieval system
