KEGG   Ictalurus punctatus (channel catfish): 108278012
Entry
108278012         CDS       T04658                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
  KO
K12842  U2-associated protein SR140
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108278012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108278012
Spliceosome [BR:ipu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108278012
 Complex B
    108278012
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc DUF2299
Other DBs
NCBI-GeneID: 108278012
NCBI-ProteinID: XP_017346614
Ensembl: ENSIPUG00000007822
UniProt: A0A2D0SVA2
LinkDB
Position
17:26196299..26209263
AA seq 954 aa
MADKTPGGTPKASSKALLESKLKAFSIGKMAVAKRTLSKKEQDELKKKEDEKAAAEIYEE
FLAAFEGGEGRVKTFVRGGIANATKEEATVDDKRGKLYKPKSKILEAKTFLPLETPPQFL
TLDKRNALKKAEKEKKKSNLELFKEELKQIQEERDERHRMKGRVSRFEPLPNVEGRRSFL
DESAPGSHDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARER
NCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMMEHTLPPPP
SGLPFNAQPKERLKNPNAPMPPPPKNKDEFEKTLSQAIVKVVIPTERNLLSLIHRMIEFV
VREGPMFEAMIMNREISNPLYRFLFENQSPAHVYYRWKLYSILQGDSPTKWRTEDFRLFK
NGSLWRPPPLNPYLHGTPQEEEEEENEDEEEEGIKKGSLKDDERDKLEEILRGLTPRRSD
VAEAMLFCLTRADAAEEIVECITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYY
RKFFEIKLCQIFSDLNATFKTIQGHLQSENFKQRVMSCFRAWEDWAVYPDPFLIKLQNIF
LGLVSLDPEKEAEVSEPTEQVEDLDGAPIVEEELDGAPLEDVDGTPIDGAPLDGAVLDDL
DGVPIKGSEEELDGLPLDGQKPGFKMAPSKWEEVDGSALQAQAITTSKWEVFDLPEESEK
SGERKTHEGDVKETVKSSSAELQSQPAKEEHQQDSKSAKLSEMSEEKRAKLREIELKVMK
FQDELESGKRPKKSGQSIQEQVELYRDKLLQREKEKEVEKDKEKEKEKKDKDKSDVTHKE
KEKEDSSSNRKEKKRRHSPSPSPSRSSSARRVRSPSPRSERSDRSHTKDSSRSTYRDSPR
DSSRKSSKRSPSPSATPKRSRRSRSRTPKKSSKKSRSRSRSPHRSHKKSKKSKH
NT seq 2865 nt   +upstreamnt  +downstreamnt
atggcggacaaaacgccaggcgggacgccgaaggccagctccaaggctttgctggaaagt
aaactgaaggccttcagcatcgggaaaatggctgtggctaaaagaactctgagtaaaaag
gaacaggatgaactgaagaagaaggaggacgagaaagcagctgcagaaatctatgaggaa
ttcctggctgcctttgagggaggtgaagggcgagtgaaaacttttgtccgaggaggaatc
gccaacgctactaaagaggaagctacagtcgatgataagagaggaaaactttacaaaccc
aaatccaaaattctggaggcgaaaacatttttaccgctggagactccgccccagtttctc
accttagacaaacgcaacgctttaaagaaagcggagaaagagaagaaaaagagcaatctg
gagcttttcaaagaagagctgaaacaaatccaggaggagcgggatgaacgccaccggatg
aagggacgagtcagtagatttgagcctctgcccaacgtggagggaagacgctccttttta
gatgaatctgctccaggctcacatgatgttggagatcctacaaccacaaacctgtacctg
ggaaacataaaccctcagatgaacgaggagatgttgtgtcaggagtttggacgctacggg
ccgttggcgagtgtgaagatcatgtggcccaggactgatgaggagagagcccgagagaga
aactgtggttttgtggccttcatgacgaggagagatgcagaacgagcgcttaaacactta
aatggaaaaatgataatgaactttgaaatgaagctgggatggggcaaaggcgtgccaatt
cccccccaccccatctacatccctccatccatgatggagcacacgctccctcctccacct
tctggtctgcccttcaacgctcagcccaaagagaggctgaagaaccccaacgcccccatg
cccccacctcccaagaacaaagacgagttcgagaagactctgtcgcaagccatagtcaaa
gtggttatcccaacagaaaggaatttgctctctctaatccaccggatgatcgagtttgtg
gtgcgtgaaggtcctatgtttgaggccatgatcatgaacagagaaattagcaaccccttg
tacaggtttttatttgagaatcagagcccggctcacgtgtattatcgttggaagttgtat
tccatcctgcagggagattctccgactaagtggaggacagaggacttcaggttgtttaag
aacggctcgttgtggcgaccgcctcctctgaacccgtacctgcacggcacacctcaggag
gaggaggaggaggagaatgaagatgaggaggaagaaggcatcaagaaaggatctctgaaa
gacgatgagagagataaactagaggagattctgcgaggtctcacccccaggaggagtgac
gttgcggaggccatgctgttctgtctcactcgcgctgacgctgcagaggagattgtcgag
tgcatcacagagtctctgtccatcctgaaaaccccgcttcctaaaaagattgcgaggtta
tatttggtgtctgatgtgttgtataactcctcggctaaagtcgctaacgcctcctattat
cggaaattctttgagattaaactgtgtcagatattctctgatctcaacgccacctttaag
acgatacagggccacttacagtctgagaattttaagcaaagagtgatgtcatgtttccga
gcgtgggaggactgggccgtgtatcctgatccgttcctcatcaaactccagaacattttc
ctgggtctcgtcagtctcgatcccgaaaaggaggcagaagtgtctgagcccactgaacag
gttgaggatttggatggtgcccccatcgtggaagaggagttggatggagcacctttagag
gatgttgatggaacaccaatcgatggagctccactagatggtgctgtactggacgacctg
gacggggttccaataaaaggatcagaggaagagctggacggccttcctctggacggacag
aaacctgggtttaaaatggctccatctaagtgggaggaagtggacggatctgctctccag
gctcaggctataactacgtcaaagtgggaagtcttcgatttgccagaggagtctgagaaa
agcggcgagaggaaaacacacgagggcgatgtgaaggagactgtgaagagttcctcggca
gaactgcagtctcagcctgctaaagaggaacatcagcaggactctaaatcggccaaactt
tcagagatgagtgaagagaaacgcgctaagctacgggagattgagctcaaagtgatgaag
tttcaggacgagctggaatccggaaaacggcccaaaaaatccggccagagtattcaggaa
caggtggagctgtacagggacaaactactgcagagggaaaaggaaaaagaagtggagaaa
gacaaagagaaggaaaaagagaaaaaggacaaggacaaatctgatgtaactcataaagag
aaggaaaaagaggactcctcgtccaacagaaaagaaaagaagcgcagacacagtccgtct
cctagtccgagtcgcagcagcagtgcccgccgtgtccgatctccatcaccgcgctctgag
cgctccgaccgctctcacaccaaggacagctcacgctccacctacagagactcgcccaga
gacagcagccgaaaatcctccaaacgatcaccttctccctccgccacacccaaacgctcc
cgcaggtccagatcacgaacgcccaaaaaatcctccaaaaaatcccgttcccgttcccgc
tcaccgcaccgctcacacaaaaaatccaaaaagagcaaacactga

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