Ictalurus punctatus (channel catfish): 108278021
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Entry
108278021 CDS
T04658
Name
(RefSeq) sodium- and chloride-dependent transporter XTRP3
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108278021
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108278021
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
108278021
NCBI-ProteinID:
XP_017346633
Ensembl:
ENSIPUG00000008481
UniProt:
W5UC51
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Position
23:20753425..20766861
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AA seq
603 aa
AA seq
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MEKEGRPSWETPTQFVLACVSYAVGLGNVWRFPYLCQMHGGGGFLIPYIIMLFLEGIPLF
YLELAVGQKMRLGSIGAFTSISPYLGGVGIASVITSMYLCLYYNVINAWSFWYLFQSFQA
VLPWSQCPLNSNHTGYLEECEIATPTQYFFFRETLNISSSIDEPGVGVHMGVALCLLLAW
SIVYLFIIQGVKSTGKVVYFTATFPYLVLIVYLIRGVTLHGALNGLKYMFTPKLEQLANP
QTWINAATQIFFSLGLGFGSLIAFASYNHHNNNFERQTIVVALINSGTSIFASIVTFSIY
GFKATFNYESCLERMRLLLLNTFNLPEDAIDKENVTSWISVLNHTHPEQLVLIQHKLEPC
SLEAELDTAVEGTGLAFIVYSEAITNMPASQVWSVLYFLMLLMLGMGSMLGNVTAIITPL
RDFKILARNFNNATLNGLVCLCCLLLGLGFTTRSGNYWFTVFNEYGTTFSLLFIVLIEVV
TVSYIYGLNRFEKDIEDMLGHRPNWYWKIMWVFVSPLLLISLFIFYIINYIQGGTPTYQA
WDKTTGKSVKMEYPVYGQIFIGLLLASSVSCVPIVAIYAFCSRHKRAVAVCEEINTVSST
ITP
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagggacggccatcatgggagactccgactcagtttgtgctggcgtgtgtg
tcgtacgctgttggtttgggaaatgtgtggagatttccttatctttgccagatgcatgga
ggaggggggtttctgattccatacatcatcatgctcttcctggagggaattcctcttttc
tatttggagcttgctgtcggacagaagatgcgtttaggcagcatcggtgcattcacttct
atcagtccctacctagggggagtggggattgcgagtgtcatcacatctatgtacctgtgt
ttgtattataacgtaattaatgcctggagcttctggtaccttttccaatcctttcaggct
gtgttgccatggtctcaatgtccactgaactccaatcatacaggatatttagaggagtgt
gaaatcgccactccaacgcaatatttcttcttccgtgagaccctgaacatttcatcgtcc
attgatgagcccggtgttggtgtccacatgggtgtggcactctgcctcctgctggcctgg
agcattgtctacctcttcatcatccaaggagtcaaatctactggcaaagtggtctatttc
accgcgacatttccatacctggttctgattgtgtatctgatccgcggtgtcactctgcat
ggagcactcaatggattaaagtacatgttcaccccaaagctggagcagttggcgaatcct
cagacgtggattaatgctgctactcagatcttcttctctcttggtttggggtttggttct
ctcattgcttttgcgagttataaccatcacaataacaactttgagcgccagactattgtt
gtcgccctcattaacagtggaacatcaattttcgccagcatcgtcaccttctccatctac
ggcttcaaagccacattcaactacgagagctgcttagagaggatgagacttttacttctg
aacacattcaatctccctgaagatgcgattgataaagaaaatgtgacgtcatggatcagt
gtgttaaatcacacacaccctgagcagcttgtgctcattcaacacaaactagagccctgc
agtctggaggctgaactggacacggctgttgaaggcactggcttagcattcattgtgtac
agtgaggcgatcacaaacatgccggcttctcaggtctggtctgttctctacttcttgatg
ttgctgatgttgggcatgggaagcatgctgggaaacgtgacagccataataacaccactg
agggacttcaaaatccttgcacggaacttcaacaatgccacactcaatggtctggtgtgt
ctttgctgtttgctgctgggtttgggtttcaccacacgttcgggtaattactggtttaca
gtgtttaatgagtatggtacgacgttctcattgctcttcatcgttctgattgaagttgtc
accgtttcctacatctatggactgaacaggtttgagaaggacattgaggacatgctgggt
catcggccgaactggtactggaagatcatgtgggtttttgtgagtccattactgctgatc
agcctcttcatcttctacattataaattacattcagggaggaacaccgacatatcaggca
tgggataaaaccacgggaaagtcagtaaaaatggagtatcctgtttatggtcagatcttc
attggccttctccttgcctcatcagtgagctgtgtgcccatcgtagctatttatgcgttc
tgttcgagacacaaacgggcagtagcagtatgtgaggaaatcaatactgtgtcatccacc
ataacaccataa
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