Ictalurus punctatus (channel catfish): 108278040
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Entry
108278040 CDS
T04658
Name
(RefSeq) medium-chain specific acyl-CoA dehydrogenase, mitochondrial
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00071
Fatty acid degradation
ipu00280
Valine, leucine and isoleucine degradation
ipu01100
Metabolic pathways
ipu01212
Fatty acid metabolism
ipu03320
PPAR signaling pathway
Module
ipu_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
ipu_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
108278040
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
108278040
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
108278040
Enzymes [BR:
ipu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
108278040
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Gene cluster
GFIT
Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
HpaB_N
ACOX_C_alpha1
Motif
Other DBs
NCBI-GeneID:
108278040
NCBI-ProteinID:
XP_017346655
Ensembl:
ENSIPUG00000007227
UniProt:
W5UCE5
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Position
17:complement(25918862..25927175)
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AA seq
419 aa
AA seq
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MLFSKVLKAGVQTGLRFSSGAARAATVVKSSNAGFSFDLTEQQKEFQELARKFAREEIVP
VAADYDKSGEYPFPLIRRAWELGLMNSHIPEDCGGLGLSSFDSCLITEELAYGCTGVQTA
IEANSLGQMPVIIAGTDEQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTRAEKKGDE
YIVNGQKMWITNGGKANWYFLLTRTNPDPKCPASKAFTGFIVDVDTPGIQIGRKEMNMGQ
RCSDTRGITFEDVRIPKENVLIGEGAGFKIAMGAFDKTRPPVAAGAVGLAQRALDEATKY
SLERKTFGRFLAEHQAVSFMLAEMAMKVELARLAYQRAAWEVDEGRKNTYYASIAKAYAG
DIANQVACDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTAQIQRLIISREHLGRYKQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcagtaaggtgttaaaggctggtgtgcagacggggttgaggttcagcagtggt
gcagctcgggcagcgactgtagtgaagagttctaatgctgggttctccttcgatctgaca
gagcagcagaaggaattccaggaactggcccggaagtttgcgcgagaggagatcgtccct
gtggctgcagactatgacaagagcggtgaatatccgtttcctctgatcaggagggcttgg
gagctcggcctgatgaactctcacatcccagaggactgcggagggctggggttgtccagc
tttgactcgtgtctgatcacggaggagctggcgtacggctgcacgggggttcagaccgcc
atcgaggccaactctctcggccaaatgcccgtcattatcgccggtaccgatgaacagaag
aagaaatatttgggcaggatgactgaggagccgctgatgtgtgcgtactgtgtaactgaa
cccggcgcaggctctgatgtggcaggaataaagactcgtgctgagaagaaaggagacgag
tacatcgtcaacggacagaagatgtggatcaccaacggaggaaaagcaaactggtatttc
ctgttgactcgtactaaccctgaccctaaatgcccggccagtaaagctttcacaggcttc
atcgtggacgtcgacactcctggaattcagatcggcaggaaggagatgaatatggggcag
aggtgctccgacactcgcggcatcaccttcgaggatgtcaggatccctaaagagaatgtg
ctgatcggagagggggcggggtttaaaatcgccatgggagccttcgacaagacacgccct
cctgttgctgcaggagcggtgggtctcgcacagagagcgctggatgaagcaactaaatat
tcactagagagaaaaacttttggtcggtttctcgccgagcaccaggccgtatcgttcatg
ctggccgagatggcgatgaaggtggagctcgcccgactggcctatcagagagcagcatgg
gaagtggacgagggcaggaagaacacctactacgcctccattgctaaggcctacgctgga
gacatcgctaatcaggtggcgtgtgacgccgtgcagatattcggaggaaacggattcaac
agcgagtatcctgtcgagaaactgatgagagatgccaagatctatcagatttatgaaggc
accgcccagatccagaggctcatcatatccagagaacatctcggcagatacaaacagtga
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