Ictalurus punctatus (channel catfish): 108278081
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Entry
108278081 CDS
T04658
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108278081
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108278081
BRITE hierarchy
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GFIT
Motif
Pfam:
HTH_CHD6-9
BRK
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
108278081
NCBI-ProteinID:
XP_053543114
UniProt:
A0A9F7RHN9
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Position
17:26133023..26144503
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AA seq
1299 aa
AA seq
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MLYYLRQEVIGDLADRILEGADSSELDIWIPQPLHAEVPTDWWDVEADKSLLIGVFKHGY
EKYNSMRADPALGFLERVGMPDAKAIAAEQRGADMVADGEDEDPEYKPLRMPFKDDMDDF
TNSPLDDKEEMMDVEGGEAPKASENGAKAGNLYWPAASALTARLRRLITAYQRCHKRQET
LIKPDGRRRRRLREDHLLAMATEGGAFTLEPNRVATTAYLTEGASFVKTSPFLHESAALL
ADGAAFFKERRQRWTRREEADFYRVVSTFGVVYDVQTQCFDWAQFRAFARLDKKTDESLE
KYYYAFVAMCKRVCRMQVKDSAELADPTLIIDPITEERASRTLYRIELLRRIREQVLPHP
ELEERLRLCQPSSDLPAWWEVGKHDRDLLHGAAKHGVSRTDYHIQNDPELGFLQAQRKFI
QGRGSEATLTSDPLTAVDLIKDEELKHELKYDTTEKVDIQEEKEGKTAAASPKQEVKTEE
EEKNQKEEMMQKENRAEVKSEENHSIPQTTEEEKVTESEDSPTLPVPALTDANKEEQENL
TGTENHKPNTEKNSEEEEEEEKMDEDDKSEKSSQADVCASSDRKNFDEESNASMSTARDE
TRDYFGMDDVEPSVSQTFGERSAFSFWPKDRVMINRMDNICEAIIKGKWPTNRRQFFDLP
GLLPGYGAIATDSPMPRRSMGDFSVMNQSSYSGSDDITMSPQVNKDEALSLSVPRQRRRR
RRKVEIEAERAAKRRNLMEMVAQLRESHVAEGQTRAMDLTKALHGLAPSSSSSSSVFPGA
VASPMELLHAAGASRANGAVLEAEIPTRRRRGRRKNVEGLELLFAGNKTSQLNTEDSNGT
KGFADGAHVPARAPRHIPAPAQKEEGGHLKGEDGASTKDLQEWLRQHPTYTMDVPGYIPK
SEELLTQLGKPKQKRHRCRNPNKIDINTLTGEERVPVVNKRNGRKMGGAMAPPMKDLPRW
LSENPEFAIAPDWTDIVKQSGFLPESMFDRLLTGPVVREEGVRRRGRRPKSEIAKAAAAQ
ASLSAASSASTSGVNPFLLNSLFGGMDLSSLQNLQNLQNLQLLMGLSPSLGAGAADNKTT
TTMLPLMLPAMSALPNVFSLGGLFGGNMAAAAAAAAANLNTNTTAASESEETKKDGELKE
EGEEKKEEAEKPAENESSDANAAAATNLSANPLAFNPFLLSTMAPGLFYPSMFLPPGLGG
LGLPGFSPAALAELQNAMSGALGGAGEEKEENEETGHNQDAVKASSTLENSDSDEGENKT
EDLTGAAEELDSVEAGEEEDDDDDDEEEEVGEDDEDKSD
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgctctactatctgagacaggaagtgatcggggacctggcagaccgcatcctggaggga
gctgattccagtgagctggatatctggattccgcagccgctccatgctgaagtccccact
gattggtgggatgtggaggctgataaatctctgctcatcggtgtgtttaaacacggttat
gagaagtataactccatgcgagccgacccggcgctggggtttttggagcgagtgggaatg
ccggatgccaaagccatcgccgctgagcagaggggagcggacatggtggcagatggagag
gatgaagacccggagtataaaccactgcgtatgcccttcaaggatgatatggatgatttc
accaactcccctctggatgataaagaggagatgatggatgtagaaggtggtgaagcccct
aaggcgagtgagaacggggctaaagctgggaatctgtactggcctgcagcgtcggctctc
accgcgcgcctgcgtcgcctcattaccgcgtaccagcgctgccacaagagacaggagacg
ctgattaaaccggacggacgcaggcgcagacgtctccgtgaggaccacctcctcgccatg
gcgaccgagggcggggctttcacgctggagccaaacagggtggccacaacagcttatcta
actgaaggagcgtcgtttgttaaaacctcaccgttcctgcacgagagcgccgccctgttg
gccgatggagctgctttcttcaaagagagacgtcagagatggacgaggcgtgaggaggca
gatttttaccgtgtggtgtctacattcggggtggtttatgacgtccagacacagtgtttc
gactgggcgcagttccgggccttcgctcgtctcgataagaaaacggacgagagtctggag
aagtattactacgccttcgtggccatgtgcaagcgggtgtgtcgcatgcaggtcaaagac
tcggcagagctggccgacccgacgctgatcatcgacccgatcacagaggagcgagcctcc
cggactctgtaccgtatcgagttactgcggcggatcagggagcaggttctgccccacccc
gagctggaggagagactgcgcctgtgtcagcccagctccgacctcccggcctggtgggag
gtgggaaaacacgaccgggaccttctccatggagccgccaagcacggagtgagtcgcaca
gactaccacatccagaacgaccccgagctcggcttcctgcaggcacaacgcaagttcatc
cagggccgaggatctgaggccacgctgacctctgaccctctcaccgccgtggatctgatc
aaagacgaggagctgaagcacgagctcaaatacgacaccacagagaaagtggacatccag
gaagaaaaagaggggaaaactgcggctgcctcacccaaacaggaagtgaagactgaagag
gaagagaagaatcagaaagaggagatgatgcagaaagaaaacagagcagaagtgaagagc
gaagaaaatcacagcattcctcaaacaaccgaagaggagaaggtcacagaatctgaggac
tcgcccacacttcctgttcctgctctcacagacgcaaacaaagaggagcaggagaacctg
actggtacagagaaccacaaacccaacactgagaagaattctgaggaggaagaggaggag
gagaagatggatgaagatgacaaatcggagaaatcgtcacaggctgacgtctgcgcgtcc
tcagacaggaagaactttgacgaggagagtaacgcctccatgagcacggcacgagacgag
acgcgggattatttcggcatggacgacgtggagccctcggtgtctcagacgttcggtgaa
cggagcgcgttctccttctggccgaaggaccgggtgatgatcaatcggatggacaacatc
tgcgaggcaatcatcaagggcaagtggccaaccaataggaggcagttctttgacttgcct
ggcctgttgcctggatatggtgccatagcaacggacagccctatgcccaggaggagcatg
ggagacttctctgtgatgaatcagagcagctacagcgggagtgatgacatcaccatgtca
ccgcaggtcaataaggatgaggctctgagtctgtcggttcctcgtcagcggagacgcagg
aggaggaaggtggagatcgaggccgagcgagctgctaagcggcgtaatctgatggagatg
gttgcgcagctccgtgagtctcacgtcgcagaaggtcagactcgagctatggatctcact
aaagctctacacgggctggctccgtcctcctcctcttcctcttcggtgttccccggcgcc
gtggcttccccgatggagctgctgcacgcggccggagcctccagagccaacggagccgtg
ctggaggctgaaattcccacacggaggaggagaggacgcaggaaaaacgttgaaggcctc
gagctgctcttcgcaggaaataagacttcgcagctcaacacggaagattcaaacgggacc
aaaggttttgcagacggggcacacgtgccggcacgagcaccgagacacattccagctcct
gcacagaaagaggagggcggccatcttaaaggagaggatggagcgagcactaaggaccta
caggagtggctcagacagcatcccacctacaccatggacgtgcctggatacataccaaag
agtgaggagcttctcacacagctgggaaaaccgaagcagaaaagacatcgctgtcgaaac
ccaaacaagatcgacatcaacacgctgaccggagaggagagagtgcctgtggtcaacaag
aggaacggccgaaagatggggggcgctatggctcctcccatgaaggatttgccgcggtgg
ctgtctgagaatccggagttcgccatcgctccagactggacagacatcgtcaaacagtct
ggtttcctgcccgagtccatgtttgaccgtctcctgaccgggcccgtggtcagagaagag
ggggtccggcgccgtggacgaagacctaaatctgagatcgctaaagcagcagcagctcaa
gcttctctctctgcagcttcttcagcctctacctcgggcgtgaaccccttcctgctcaac
agcctgtttgggggaatggacctgagcagcctgcagaacctacagaacctacagaacctg
cagctcctcatgggcttgtctccttctcttggtgcaggagctgcagataacaagaccacc
accaccatgttgccactgatgctgcctgccatgagtgccctgcccaatgtctttagcctt
ggggggctttttggaggcaacatggcggcggcggcggctgctgctgctgcaaacttaaat
acaaacaccacggctgcttcagagtctgaggagacaaagaaagatggagaactcaaggag
gaaggcgaggagaagaaggaggaggcagagaaacctgctgagaacgagtcgagtgacgca
aatgcggctgcagcaaccaatctttctgccaatcctctggcgtttaacccgttcctgctc
tccaccatggctcctgggcttttctacccctccatgttccttccccctggcttgggcggt
ttagggctgcccggcttttctccagcagctctcgctgagctccagaacgcaatgagtggc
gcattaggaggtgctggagaggagaaggaggagaacgaggagacggggcacaaccaggat
gcagtaaaagccagcagcactctggagaacagcgactctgacgagggcgagaacaaaacc
gaggatctgaccggagcggccgaggaactggactccgtggaggcaggagaggaagaggac
gacgacgacgacgatgaggaggaagaagttggagaagatgatgaggacaagagtgactga
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