Ictalurus punctatus (channel catfish): 108278100
Help
Entry
108278100 CDS
T04658
Symbol
socs9
Name
(RefSeq) suppressor of cytokine signaling 9
KO
K04698
suppressor of cytokine signaling 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108278100 (socs9)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
108278100 (socs9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOCS_box
SOCS
SH2
Activator_LAG-3
Med3
DUF7658
Motif
Other DBs
NCBI-GeneID:
108278100
NCBI-ProteinID:
XP_017346743
UniProt:
A0A2D0SVP4
LinkDB
All DBs
Position
17:complement(2041563..2049053)
Genome browser
AA seq
542 aa
AA seq
DB search
MSTGDAGDRGKERERGARPKVRQSRSEERQDGGRRKGGRGKRKGRLAHDAASDRPVSDGF
EYGDLLNGLEPGNTGSSFRERRWRQVLGSPASSLSEKVPARISQSTLNDEQPMPETSSKS
SGGSRTLRQKIQDAVGQCFPIKTHSGPSASGSGISASPVAASSRRKIHLSELMLDSCPFP
PDSELAQKWYLIKQHTAPVSQPPVLDAFSACSASSASVVEDEDDRLRERRRISIEQGVDP
PPNAQIHTFEVTAQINPLYKLGPKLAHGMNELAGDDRATLQQQQQQQQQQQQQQQHVLQR
QQQHHQLLLQSCLDTLDEVVASSSGSAPSFPTESHPDSDSSSSSPCSLTRASLVTTEHFK
PQDGHHRAHTQIDYIHCLVPDLLQITNLPCYWGVMDRYEAETLLEGKPEGTFLLRDSAQE
DYLFSVSFRRYGRSLHARIEQWNHNFSFDVHDPSVFHAPTVTGLLEHYKDPNSCMFFEPL
LSSPIHRTRPFSLQHICRAVISSCTTYDGISALPIPNALKEHLKEYHYKQRVRVRRLDTG
WE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccggagacgcaggggaccgtgggaaagaaagggaacggggtgcccgtcccaaa
gtgcgtcagagccggtctgaggaacggcaggatggagggaggcggaaaggaggcaggggt
aaaaggaaaggccgcttggctcacgatgcggcgtcggaccggccggtcagcgacggattc
gaatacggcgatctcttaaacgggctggaacccggaaacacaggttcttcatttcgtgaa
cgccggtggcgccaagtcctcggctcacccgcgtcctcgttgagcgagaaagtcccggcc
aggatatctcagagcactctgaacgacgaacagcctatgcccgagaccagcagcaagtct
tctggcggcagtcgtaccctcaggcagaagattcaggacgccgtaggccagtgttttccc
atcaagacccacagtggaccttctgcttcaggatcgggcatctcggcgtctcctgtcgca
gcttcttcccggaggaagatccatctgagtgaactcatgctggacagttgcccgttccca
cctgactccgagctagcgcagaaatggtacctgatcaagcagcatacggctcctgtttcc
caaccgcccgtactcgacgctttctctgcgtgctctgcttcctcggcttctgtcgtcgag
gacgaggatgatcgcttgcgagagaggcggagaataagcatcgagcaaggcgtcgaccca
ccgcccaatgcgcagatccacacgttcgaggtgaccgcgcagatcaacccgctgtacaag
ctcgggcccaagttggcgcacgggatgaacgagttggccggggacgaccgggccactcta
caacaacaacaacaacaacaacaacagcagcagcagcagcagcagcatgtgctgcagagg
cagcaacagcaccaccaactgcttctccagagctgcttggacactctagacgaggtcgtc
gcgtcttcctcaggatccgccccatcctttcctaccgaatcccatccggattcggattcc
tcctcatcttcgccgtgttcactgacaagagcgtccctggtgacgacggagcacttcaaa
cctcaagatggccaccatcgtgcccacacgcagatcgattacatccactgcttggtgccg
gacctgctccagatcaccaacctgccgtgttactggggggtcatggatcgctacgaggcc
gagacgctcctggaaggcaaacccgagggaaccttccttcttcgcgactcggcccaggag
gactacttattctcggtcagcttccggcgctacggccgctctctgcacgcccgtatcgag
cagtggaaccacaacttcagcttcgacgtacacgaccccagtgtgttccatgcacccacg
gtcacgggcttgctcgagcattacaaggaccccaactcgtgcatgttcttcgagccactg
ctctcaagtcccatccatcgcacgcggccgttcagcctccagcacatctgtcgcgccgtc
atcagcagctgcaccacctatgacggcattagtgccctgcccatccccaacgccctcaag
gagcacctgaaggaatatcattacaagcagagggttcgtgtacggagactcgataccggc
tgggagtga
DBGET
integrated database retrieval system
