Ictalurus punctatus (channel catfish): 108278114
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Entry
108278114 CDS
T04658
Symbol
lrrc8da
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108278114 (lrrc8da)
Ion channels [BR:
ipu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
108278114 (lrrc8da)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_4
LRR_8
LRR_14
LRR_1
LRR_5
LRR_R13L1-DRL21
LRR_9
LRR_13
LRR_EndoS
LRR_LRWD1
TEX29
Motif
Other DBs
NCBI-GeneID:
108278114
NCBI-ProteinID:
XP_017346780
Ensembl:
ENSIPUG00000016992
UniProt:
A0A2D0SWU0
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Position
17:complement(20313433..20320627)
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AA seq
829 aa
AA seq
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MFTLTEVASLNDIQPTYRILKPWWDVFMDYLGFVMLMLAIFAGTMQITKDQVACLPILEE
ANKTSNTNAYMSSSPVEATTSPFGTVPVATRDLPDSMVHKISLHAEPQPKGRKTNLDYQQ
YIFVNQICYHVALPWYSKYFPYLVLIHTIVLMVSSNFWFKYPKTSSKIEHFVSILGRCFE
SPWTTKALSETAYEDSEGNKQRFIADQSGPKHLSSDSQDERADSTQPILGNNSVKFSAEK
IIPEGPSMTILDKKDGEQAKALFEKVRTFRAHVEDSDFIYKLYVAQTIIKALKLIVILGY
TSTFAADISFSHICEPKIEHLTGYDRFFCTHNMAFMLKKLLFTFMAIIGLYCLVCLYALF
WLFRGPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLHSKRFGIFLSEVSENK
LREISLNHEWTLEKLRQHVTSNAQDKQELHLFMLSGLPNAVFDLAELEVLKLELIPEVRI
SAKVSQMTNLQELHLYNCPAKVEQRAFIFLRDHLRCLHVKFTDVSEIPPWVYLLRSLREL
YLIGSLNSEHNKMIGLESLKDLRHLKVLYLKSNLSKTPTNLTDLSPHLIKLVVHNDGTKL
LVLNSLKKMTSLRELELHHCDLERIPEAIFNLTNLQDLDMKSNNFRTIEEVIRFQHLKRL
TCLKLWHNKIVSIPSNINLMKNLESLYLSYNKLETLPAALFHMPKLRYLDLGNNSIALIP
DDVEFLHNLQHFDITGNKVEVLPEQLFRCTKLKVLCMGNNSITILSESIGQLTELVQLDV
KGNCLAQLPNNLSQCRQLHKSLFIVEDHLFDTLPLEVKESMTVVPTFTV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctgactgaagtggcctcgcttaatgacatccagcccacatatcggatactg
aagccatggtgggacgtcttcatggattacctcggtttcgtcatgttgatgttagccatc
tttgccgggacgatgcagataaccaaagatcaagtggcatgtcttcccattctagaggag
gctaataagacatcaaacacaaacgcgtacatgtcatctagcccagtggaggccaccacg
tcaccttttggaactgtccccgtagccactcgggatcttccggacagcatggtgcataaa
attagcctccatgctgagcctcaacccaaaggacgcaaaacgaacttggactatcagcag
tacatttttgtcaaccagatatgttaccatgttgccttgccctggtactcaaagtacttt
ccttacctagtcctgatacacaccatcgtgttgatggtaagcagcaatttttggttcaaa
tacccaaagaccagctcaaagatcgagcactttgtgtccatcctcggcaggtgctttgaa
tcaccctggaccacgaaggcgttgtccgaaactgcatacgaagactccgaaggaaacaag
cagagattcattgccgatcagtccggtcctaagcacctatcctcagatagccaagatgag
cgtgccgattcaacccagcctatattaggaaacaacagcgtgaagttctcagctgagaag
atcattcctgaaggtccaagtatgacgattttggacaaaaaagatggcgagcaagccaag
gcactgttcgagaaggttcggaccttccgagctcatgtcgaggacagcgacttcatctac
aaactctatgtggcacagacgatcatcaaagcgctcaagttaatcgttatcctgggttac
acgtcaacttttgctgcagacatcagtttttctcatatatgtgaacccaaaatcgagcac
ttaaccgggtatgatcgattcttctgcacccacaatatggccttcatgctgaagaagctc
ctatttacattcatggcgataatcggcctttattgcctcgtgtgcctgtatgcacttttc
tggctttttcgaggtccactcaaggaatactcatttgaaaaagtcagagaggaaagcagc
ttcagcgatatccctgatgtcaaaaacgactttgcattcctcctccatatggtcgaccag
tacgaccagttacactccaagcgatttgggattttcctttcagaggtcagtgagaacaag
cttcgagaaattagtcttaatcacgaatggacgctagagaaactgcgtcagcatgtaacc
agcaacgcccaagacaagcaggagctgcacttgttcatgctctcgggactgcccaatgct
gtattcgatctcgctgagcttgaagttcttaagctagaactcatccctgaggtcaggatt
tcagccaaggtttcccagatgaccaatttacaggaacttcatctgtataactgtcctgcc
aaggtggagcaaagagctttcattttcctccgagatcacctacggtgccttcatgtgaag
tttaccgatgtctcagaaatccctccatgggtttatctgttgaggagccttcgggaactg
tacctgattggtagcttaaactcggaacacaacaaaatgattggtttggaatccctgaaa
gacttaaggcacctaaaggtattatatctcaaaagcaacctcagcaaaacgcccaccaac
ctcacagatctctctccacacctcatcaagctggttgtgcacaacgacgggactaaattg
ctagtactgaacagtcttaagaagatgacgagcttgcgtgagttggagctccatcactgt
gacctggagaggatccctgaagctattttcaacttgacaaacctgcaagacttggatatg
aaatccaacaacttccggaccatcgaggaggtcatccgctttcagcacctgaagagactg
acgtgcctcaagttgtggcacaacaagatcgtatccattccatcaaacataaatttgatg
aagaacctcgagtcactctacctctcctacaacaaactggagactctaccagctgctctg
tttcacatgccaaagctccggtacctggatctcggaaataactccattgcgttgattcca
gacgacgtggaatttctccataacctacagcactttgatatcacagggaataaggtagag
gttcttcccgaacagctgttcagatgcaccaaactgaaagtcctctgcatgggtaacaac
agcatcaccatcctttctgaatccatcggacagttaacggaactagttcaactcgacgtg
aaagggaactgcttggctcaacttccaaacaatcttagtcaatgtcgacagcttcataaa
agcttattcatagtggaggatcacctttttgacacacttccacttgaggtaaaagagagt
atgacagtggtgccaacatttacagtttag
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